RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 DYRK4Q9NR20 520 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 MPOP05164 745 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 ABHD2P08910 425 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 FAM58BPP0C7Q3 252 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 TMED10P49755 219 aaKnown RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 PKNOX1P55347 436 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 ATP6AP1LQ52LC2 224 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 MARC1Q5VT66 337 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 ZDHHC17Q8IUH5 632 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 P2RX7Q99572 595 aaKnown RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 PIDD1Q9HB75 910 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 KANSL1LA0AUZ9 987 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 AGPSO00116 658 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 HNRNPRO43390 633 aaKnown RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 PIGNO95427 931 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 GLP2RO95838 553 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 TPBGLP0DKB5 382 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 UBA1P22314 1058 aaKnown RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 SLC11A2P49281 568 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 ZNF157P51786 506 aaPredicted RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 SLC25A3Q00325 362 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 TTLL9Q3SXZ7 439 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 RIPOR1Q6ZS17 1223 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 OTOAQ7RTW8 1153 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 TMC7Q7Z402 723 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 PATL1Q86TB9 770 aaKnown RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 RASGEF1CQ8N431 466 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 ACSS3Q9H6R3 686 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 SYTL2Q9HCH5 934 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 EIF3LQ9Y262 564 aaKnown RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 A0A1W2PPM1 405 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 C2CD2LO14523 706 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.161e-10■■□□□ 14.1
VCP-201ENST00000358901 HOXD10P28358 340 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 PTDSS1P48651 473 aaKnown RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 UBE3AQ05086 875 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 TRABD2AQ86V40 505 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 DDHD1Q8NEL9 900 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 OR6Y1Q8NGX8 325 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SEPHS2Q99611 448 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SPASTQ9UBP0 616 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 ARHGAP23Q9P227 1491 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 TCRBV7S2A1N4TA0A589 114 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 F5H5T6 163 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 OAZ1P54368 228 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 MRPS22P82650 360 aaKnown RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 GRIK4Q16099 956 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 OTUD3Q5T2D3 398 aaPredicted RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 PKN3Q6P5Z2 889 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SLC27A1Q6PCB7 646 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 PHF13Q86YI8 300 aaPredicted RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 CPNE1Q99829 537 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 PACSIN3Q9UKS6 424 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 R3HDM2Q9Y2K5 976 aaKnown RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 hCG_1818297A0A087WSY0 165 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SLC12A8A0AV02 714 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SPTLC1O15269 473 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 PLA2G6O60733 806 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 KRT36O76013 467 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 LCA5LO95447 670 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 ATP6V1B2P21281 511 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 TNFSF9P41273 254 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SLC44A4Q53GD3 710 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 CACHD1Q5VU97 1274 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 ZSCAN18Q8TBC5 510 aaPredicted RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 LRRN4Q8WUT4 740 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 OTUB1Q96FW1 271 aaPredicted RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 CROTQ9UKG9 612 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SYNPO2Q9UMS6 1093 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 ADGRA3Q8IWK6 1321 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 INPP4BO15327 924 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 ARHGEF9O43307 516 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 ALDH1A1P00352 501 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 CCDC130P13994 396 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 CDK7P50613 346 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 HUNKP57058 714 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 RUNX1T1Q06455 604 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 CDH18Q13634 790 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 NPY5RQ15761 445 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 TRIM16LQ309B1 348 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 SPANXN3Q5MJ09 141 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 UGT3A1Q6NUS8 523 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 RAET1EQ8TD07 263 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 DNAJB3Q8WWF6 145 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 RNF157Q96PX1 679 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 MMADHCQ9H3L0 296 aaPredicted RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 TRIM45Q9H8W5 580 aaPredicted RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 FBXO6Q9NRD1 293 aaPredicted RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 DDX18Q9NVP1 670 aaKnown RBP14.04□□□□□ -0.16
VCP-201ENST00000358901 ATP11BQ9Y2G3 1177 aa14.04□□□□□ -0.16
VCP-201ENST00000358901 MROH7Q68CQ1 1323 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 TPP1O14773 563 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 MRASO14807 208 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 CHADO15335 359 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 WDR47O94967 919 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms