RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 BTG3Q14201 252 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 LRIG3Q6UXM1 1119 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 ARID3BQ8IVW6 561 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 C6orf62Q9GZU0 229 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 GBA2Q9HCG7 927 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 GPAMQ9HCL2 828 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 MSRAQ9UJ68 235 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 ARIH1Q9Y4X5 557 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 LYVE1Q9Y5Y7 322 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 OR56A5P0C7T3 313 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 C21orf59P57076 290 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 TMC5Q6UXY8 1006 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 C16orf86Q6ZW13 317 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 MARK2Q7KZI7 788 aaKnown RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 SLC13A5Q86YT5 568 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 SRBD1Q8N5C6 995 aaKnown RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 PTPRHQ9HD43 1115 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 MARK1Q9P0L2 795 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 CNTNAP2Q9UHC6 1331 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 TMEM120BA0PK00 339 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 CASTOR2A6NHX0 329 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 RBAK-RBAKDNI3L0D1 243 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 TAF4O00268 1085 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 MAP3K6O95382 1288 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 GPR15P49685 360 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 TGFB2P61812 414 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 MYBPC1Q00872 1141 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 KRT73Q86Y46 540 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 SUGP1Q8IWZ8 645 aaKnown RBP10.42□□□□□ -0.74
CLIP1-202ENST00000358808 CCDC185Q8N715 623 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 ENKURQ8TC29 256 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 UBASH3BQ8TF42 649 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 FAM111AQ96PZ2 611 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 BPIFA3Q9BQP9 254 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 RAD21L1Q9H4I0 556 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 EFCAB1Q9HAE3 211 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 KCND2Q9NZV8 630 aa10.42□□□□□ -0.74
CLIP1-202ENST00000358808 ENO4A6NNW6 628 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 TYMPP19971 482 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 NTSP30990 170 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 PUDPQ08623 228 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 SETMARQ53H47 684 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 BNC2Q6ZN30 1099 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 CDH24Q86UP0 819 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 ZNF677Q86XU0 584 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 CLEC10AQ8IUN9 316 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 COL26A1Q96A83 441 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 KCNS3Q9BQ31 491 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 CBWD1Q9BRT8 395 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 PDS5AQ29RF7 1337 aaKnown RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 USP42Q9H9J4 1324 aaKnown RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 MYO5BQ9ULV0 1848 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 TIMM44O43615 452 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 TRIM28Q13263 835 aaKnown RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 CYP2A13Q16696 494 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 SEZ6Q53EL9 994 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 BOLA3Q53S33 107 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 ERMARDQ5T6L9 678 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 TAF8Q7Z7C8 310 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 TERB1Q8NA31 727 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 KLHL23Q8NBE8 558 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 CNGB3Q9NQW8 809 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 STK39Q9UEW8 545 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 A0A1W2PQC6 194 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 SH3BGRLO75368 114 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 F9P00740 461 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 THP07101 528 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 WARSP23381 471 aaKnown RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 HPCAL1P37235 193 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 IRX1P78414 480 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 EXOSC10Q01780 885 aaKnown RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 PPIL2Q13356 520 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 SLC18A3Q16572 532 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 TRPV3Q8NET8 790 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 PROX1Q92786 737 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 ZNF354BQ96LW1 612 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 APOL2Q9BQE5 337 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 MXRA8Q9BRK3 442 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 ABCG4Q9H172 646 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 AASDHPPTQ9NRN7 309 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 ADPRHL2Q9NX46 363 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 PDE5AO76074 875 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 VTNP04004 478 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 RBP1P09455 135 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 NRG3P56975 720 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 PDIA5Q14554 519 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 JAMLQ86YT9 394 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 SMYD1Q8NB12 490 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 C3orf20Q8ND61 904 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 OR2W6PQ8NHA6 318 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 SUSD6Q92537 303 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 UBAP1Q9NZ09 502 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 SUCOQ9UBS9 1254 aaKnown RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 FAM153AQ9UHL3 310 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 TUBE1Q9UJT0 475 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 KPNA3O00505 521 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-202ENST00000358808 RAD51BO15315 384 aa10.41□□□□□ -0.74
CLIP1-202ENST00000358808 IDH3BO43837 385 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms