RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 EPAS1Q99814 870 aa17.64■□□□□ 0.41
TPM1-205ENST00000357980 NEUROG2Q9H2A3 272 aa17.64■□□□□ 0.41
TPM1-205ENST00000357980 XPO7Q9UIA9 1087 aaKnown RBP17.64■□□□□ 0.41
TPM1-205ENST00000357980 SNX24Q9Y343 169 aa17.64■□□□□ 0.41
TPM1-205ENST00000357980 PCDHA11Q9Y5I1 949 aa17.64■□□□□ 0.41
TPM1-205ENST00000357980 ATG2AQ2TAZ0 1938 aa17.64■□□□□ 0.41
TPM1-205ENST00000357980 GGCXP38435 758 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 TUBP50607 506 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 RBM10P98175 930 aaKnown RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 RING1Q06587 406 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 TRIP13Q15645 432 aaPredicted RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 MANEALQ5VSG8 457 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 GSTA5Q7RTV2 222 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 TMEM150AQ86TG1 271 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 MIB1Q86YT6 1006 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 OLFM3Q96PB7 478 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 C10orf88Q9H8K7 445 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 ZDHHC18Q9NUE0 388 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 DTLQ9NZJ0 730 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 TRPM5Q9NZQ8 1165 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 UXTQ9UBK9 157 aaPredicted RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 YBX2Q9Y2T7 364 aaKnown RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 TP73O15350 636 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 MFSD11O43934 449 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 KRT14P02533 472 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 FAM153BP0C7A2 387 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 PPP3CCP48454 512 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 GDF10P55107 478 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 NRG1Q02297 640 aaPredicted RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 HLTFQ14527 1009 aaKnown RBP eCLIP17.63■□□□□ 0.41
TPM1-205ENST00000357980 PAFAH1B3Q15102 231 aaKnown RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 TAF12Q16514 161 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 FAM153CQ494X1 144 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 EMBQ6PCB8 327 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 ZDHHC24Q6UX98 284 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 CCDC149Q6ZUS6 474 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 ITIH5Q86UX2 942 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 ZC3H18Q86VM9 953 aaKnown RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 CCDC89Q8N998 374 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 KREMEN2Q8NCW0 462 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 SAMD11Q96NU1 681 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 ZNF334Q9HCZ1 680 aaPredicted RBP17.63■□□□□ 0.41
TPM1-205ENST00000357980 ASIC3Q9UHC3 531 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 FAM153AQ9UHL3 310 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 DNMT3LQ9UJW3 386 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 ASB3Q9Y575 518 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 DOCK4Q8N1I0 1966 aa17.63■□□□□ 0.41
TPM1-205ENST00000357980 SGK1O00141 431 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 CSPG5O95196 566 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 MAP3K6O95382 1288 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 GLUD1P00367 558 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 C8AP07357 584 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 ERCC2P18074 760 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 HOXC13P31276 330 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 HTR7P34969 479 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 IRS1P35568 1242 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 CLCN4P51793 760 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 ERVK-21P61565 698 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 XRCC4Q13426 336 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 TADA2BQ86TJ2 420 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 PRUNE1Q86TP1 453 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 UNC45BQ8IWX7 931 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 CAVIN3Q969G5 261 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 C1orf74Q96LT6 269 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 SIK2Q9H0K1 926 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 IL21Q9HBE4 155 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 PCDH9Q9HC56 1237 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 HBS1LQ9Y450 684 aaKnown RBP17.62■□□□□ 0.41
TPM1-205ENST00000357980 HS3ST4Q9Y661 456 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 MYO7AQ13402 2215 aa17.62■□□□□ 0.41
TPM1-205ENST00000357980 SLC12A8A0AV02 714 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 COCHO43405 550 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 MOCS2O96007 188 aaPredicted RBP17.61■□□□□ 0.41
TPM1-205ENST00000357980 OAS1P00973 400 aaKnown RBP17.61■□□□□ 0.41
TPM1-205ENST00000357980 APOEP02649 317 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 ETS1P14921 441 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 ATP5C1P36542 298 aaKnown RBP17.61■□□□□ 0.41
TPM1-205ENST00000357980 KPNA1P52294 538 aaPredicted RBP17.61■□□□□ 0.41
TPM1-205ENST00000357980 PIK3R6Q5UE93 754 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 CCHCR1Q8TD31 782 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 SNF8Q96H20 258 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 BTN2A3PQ96KV6 586 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 USP29Q9HBJ7 922 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 WHRNQ9P202 907 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 CDH23Q9H251 3354 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 BCLAF3A2AJT9 711 aaKnown RBP17.61■□□□□ 0.41
TPM1-205ENST00000357980 H7C0C1 242 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 F11P03951 625 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 ZSCAN5DPP0CG00 497 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 EPHB2P29323 1055 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 PBX2P40425 430 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 ATP5OP48047 213 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 MLLT6P55198 1093 aaPredicted RBP17.61■□□□□ 0.41
TPM1-205ENST00000357980 DARS2Q6PI48 645 aaKnown RBP17.61■□□□□ 0.41
TPM1-205ENST00000357980 B4GALNT4Q76KP1 1039 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 ZNF683Q8IZ20 524 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 FAM71DQ8N9W8 422 aa17.61■□□□□ 0.41
TPM1-205ENST00000357980 FBXO25Q8TCJ0 367 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms