RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 MPP3Q13368 585 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PRKD1Q15139 912 aaPredicted RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 RAB6CQ53S08 254 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PMF1Q6P1K2 205 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 POTEAQ6S8J7 498 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 C4orf22Q6V702 233 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 NET1Q7Z628 596 aaPredicted RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 WDTC1Q8N5D0 677 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
RTN4-203ENST00000357376 FNIP1Q8TF40 1166 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 ZNF333Q96JL9 665 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 ECSITQ9BQ95 431 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 LPIN3Q9BQK8 851 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 EFHD1Q9BUP0 239 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 RAB6CQ9H0N0 254 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 ASB7Q9H672 318 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 CAB39LQ9H9S4 337 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 KIAA1257Q9ULG3 409 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 VANGL2Q9ULK5 521 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 AURKCQ9UQB9 309 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 CDYLQ9Y232 598 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 C3orf70A6NLC5 250 aaPredicted RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 TPST1O60507 370 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PMPCBO75439 489 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 METTL18O95568 372 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 JCHAINP01591 159 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 ITGA2BP08514 1039 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 T-ENOLP0DO92 83 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 MCF2P10911 925 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 SERPINB8P50452 374 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 SEL1L3Q68CR1 1132 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 DLK2Q6UY11 383 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 KYAT3Q6YP21 454 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 HPS6Q86YV9 775 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 RELL1Q8IUW5 271 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PYROXD2Q8N2H3 581 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PCDH19Q8TAB3 1148 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 LRRC39Q96DD0 335 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 PIWIL1Q96J94 861 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 HIC2Q96JB3 615 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 SYT15Q9BQS2 421 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 MRPL45Q9BRJ2 306 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 UPF3AQ9H1J1 476 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 LRRC40Q9H9A6 602 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 CHST12Q9NRB3 414 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 ITGA11Q9UKX5 1188 aa7.02□□□□□ -1.29
RTN4-203ENST00000357376 RUVBL2Q9Y230 463 aaKnown RBP7.02□□□□□ -1.29
RTN4-203ENST00000357376 DYNC1LI2O43237 492 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 PAPSS1O43252 624 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 B4GALT4O60513 344 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 TM7SF2O76062 418 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SERPINA6P08185 405 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 GM2AP17900 193 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 TFE3P19532 575 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 CNTFP26441 200 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 GCAP28676 217 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 GSTT1P30711 240 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 NEK3P51956 506 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 KPNA2P52292 529 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 BST2Q10589 180 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 PDE1CQ14123 709 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 TNFAIP8L3Q5GJ75 292 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 KLC3Q6P597 504 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 C16orf89Q6UX73 402 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 BNC2Q6ZN30 1099 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 DHDDSQ86SQ9 333 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 CHSY1Q86X52 802 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 LRRC43Q8N309 656 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 OR6Y1Q8NGX8 325 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 FAM136AQ96C01 138 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 VPS39Q96JC1 886 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 CDRT15Q96T59 188 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 EPAS1Q99814 870 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 PRDM12Q9H4Q4 367 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SSU72Q9NP77 194 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 PDGFCQ9NRA1 345 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SYBUQ9NX95 663 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 CYTH4Q9UIA0 394 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 RPL26L1Q9UNX3 145 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 TNFSF13BQ9Y275 285 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SSX2IPQ9Y2D8 614 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 PCDHA11Q9Y5I1 949 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 TIMM13Q9Y5L4 95 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 C10orf71Q711Q0 1435 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 A0A0A0MRY4 1105 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 RNF103-CHMP3A0A140T963 221 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ASB14A6NK59 587 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 GMNNO75496 209 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 TGDSO95455 350 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 TSHRP16473 764 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ARF4P18085 180 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 PGAM1P18669 254 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 MAP3K7CLP57077 242 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ABCE1P61221 599 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 POU6F1Q14863 301 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 PACS1Q6VY07 963 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 IFNEQ86WN2 208 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 OR6J1Q8NGC5 347 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ZSCAN18Q8TBC5 510 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 EDEM1Q92611 657 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms