RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 MYL12AP19105 171 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 ERVK-24P63145 666 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 MZT2BQ6NZ67 158 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 CDC73Q6P1J9 531 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 TMEM26Q6ZUK4 368 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 MTFMTQ96DP5 389 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 ADGRE3Q9BY15 652 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 TMEM8AQ9HCN3 771 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 GDF3Q9NR23 364 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 OR6A2O95222 327 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 MSH3P20585 1137 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PAICSP22234 425 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 ARPC4P59998 168 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 STX12Q86Y82 276 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CPB2Q96IY4 423 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 GOLGA4Q13439 2230 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 BMP10O95393 424 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CCT3P49368 545 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 TIGD7Q6NT04 549 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 LRMDAQ9H2I8 198 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 POLR1BQ9H9Y6 1135 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 TRPM1Q7Z4N2 1603 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 SNAP91O60641 907 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 RGS20O76081 388 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 SLC2A3P11169 496 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 DNAJB2P25686 324 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PTDSS1P48651 473 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 HNMTP50135 292 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CDKAL1Q5VV42 579 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 FBXO25Q8TCJ0 367 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 TCF7L2Q9NQB0 619 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 VPS28Q9UK41 221 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 GON4LQ3T8J9 2241 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 ERI2A8K979 691 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 MEI4A8MW99 385 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CCDC166P0CW27 439 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CCNG2Q16589 344 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 ZNF662Q6ZS27 426 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 STRA8Q7Z7C7 330 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CBWD2Q8IUF1 395 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 SLC22A9Q8IVM8 553 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CRNNQ9UBG3 495 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CD3EAPO15446 510 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 VAV1P15498 845 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PRKAA1Q13131 559 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 TUBA3CQ13748 450 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 TFDP3Q5H9I0 405 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 FGD3Q5JSP0 725 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PRAMEF18Q5VWM3 479 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 NT5DC3Q86UY8 548 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 HERC6Q8IVU3 1022 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 DPF3Q92784 378 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 COLEC11Q9BWP8 271 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 WDR41Q9HAD4 459 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 IDH3BO43837 385 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 SASH3O75995 380 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 KRT33AO76009 404 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 RBP1P09455 135 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 MUTP22033 750 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CHRNA5P30532 468 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 STAT5AP42229 794 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 AAGABQ6PD74 315 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PEG10Q86TG7 708 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 SEPHS2Q99611 448 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 RAD51BO15315 384 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 CCNT2O60583 730 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 ATG7O95352 703 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 PABPC1P11940 636 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 IL12AP29459 219 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 DSG4Q86SJ6 1040 aa11.76□□□□□ -0.53
SPTBN1-202ENST00000356805 LDLRP01130 860 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 RHAGQ02094 409 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 NAB1Q13506 487 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 TSPAN14Q8NG11 270 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 TEX13BQ9BXU2 312 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 ELOVL6Q9H5J4 265 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 TMA7Q9Y2S6 64 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 IGSF9BQ9UPX0 1349 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 CLUP10909 449 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 TAF5Q15542 800 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 SRBD1Q8N5C6 995 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 DHRSXQ8N5I4 330 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 SPPL2AQ8TCT8 520 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 PDCD10Q9BUL8 212 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 NT5MQ9NPB1 228 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 FBXL21Q9UKT6 434 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 B3GAT3O94766 335 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 SERPINE1P05121 402 aa11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 POLR2EP19388 210 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-202ENST00000356805 GEMP55040 296 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms