RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TAS2R13Q9NYV9 303 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SPG21Q9NZD8 308 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SH3BP4Q9P0V3 963 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 VAV3Q9UKW4 847 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 DNPEPQ9ULA0 475 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PCDHGA4Q9Y5G9 962 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 STON1Q9Y6Q2 735 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CLTCL1P53675 1640 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ZNF862O60290 1169 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CCNT2O60583 730 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 ITGB6P18564 788 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 KLK7P49862 253 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MSLNQ13421 630 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 CRYMQ14894 314 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TAB1Q15750 504 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 NFIL3Q16649 462 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 AMHR2Q16671 573 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 GLRA4Q5JXX5 417 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TYW3Q6IPR3 259 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 GJB7Q6PEY0 223 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ZBTB49Q6ZSB9 765 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ILDR2Q71H61 639 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ULK2Q8IYT8 1036 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 FBXO39Q8N4B4 442 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CSGALNACT1Q8TDX6 532 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TRIM63Q969Q1 353 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 AHCYL2Q96HN2 611 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 HIC2Q96JB3 615 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 NSMCE2Q96MF7 247 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SYT15Q9BQS2 421 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CIPCQ9C0C6 399 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ELOVL4Q9GZR5 314 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 RACGAP1Q9H0H5 632 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 KCNF1Q9H3M0 494 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 AGO4Q9HCK5 861 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 POLR1DQ9Y2S0 133 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 DLC1Q96QB1 1528 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 KCNQ2O43526 872 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 TPST1O60507 370 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ATG7O95352 703 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 MED26O95402 600 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 MYL4P12829 197 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ATP6V1B1P15313 513 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CLK3P49761 638 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 ERFP50548 548 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 OAZ1P54368 228 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 RASA2Q15283 850 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CBWD3Q5JTY5 395 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CBWD5Q5RIA9 395 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 PDZK1Q5T2W1 519 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 FAXCQ5TGI0 409 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 RSBN1Q5VWQ0 802 aaPredicted RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 OR8H2Q8N162 312 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CAMKK1Q8N5S9 505 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 SOCS4Q8WXH5 440 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 LRRC39Q96DD0 335 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ZFRQ96KR1 1074 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 TBL1YQ9BQ87 522 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 TMEM216Q9P0N5 145 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ENTPD4Q9Y227 616 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ZBTB12Q9Y330 459 aaPredicted RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 NDUFAF1Q9Y375 327 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ZDHHC9Q9Y397 364 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ARIH1Q9Y4X5 557 aaPredicted RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 PCDHA3Q9Y5H8 950 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 SNX8Q9Y5X2 465 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CCDC154A6NI56 674 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 FOXN3O00409 490 aaPredicted RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 MYL12BO14950 172 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 FAM58BPP0C7Q3 252 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 FGFR2P21802 821 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CXCR2P25025 360 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 NTSP30990 170 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 GP5P40197 560 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 STAT5AP42229 794 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 GPR15P49685 360 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 IL5RAQ01344 420 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 PEX6Q13608 980 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 EPC2Q52LR7 807 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 WASHC2DQ5SRD0 308 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ZNF618Q5T7W0 954 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 RINLQ6ZS11 566 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 NECAB2Q7Z6G3 386 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 PEG10Q86TG7 708 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 TXNRD3Q86VQ6 643 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 EPS8L3Q8TE67 593 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 ANKRD7Q92527 254 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ACSF2Q96CM8 615 aaPredicted RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 MED8Q96G25 268 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 BBS4Q96RK4 519 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 A1CFQ9NQ94 594 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 DDX43Q9NXZ2 648 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 GALNT8Q9NY28 637 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CROTQ9UKG9 612 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 TNPO3Q9Y5L0 923 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 CNTNAP2Q9UHC6 1331 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 DYTNA2CJ06 578 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 SNUPNO95149 360 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 JCHAINP01591 159 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 PAEPP09466 180 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms