RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TCAIMQ8N3R3 496 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 OR7A2PQ8NGA2 310 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 USP7Q93009 1102 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 LRRC40Q9H9A6 602 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 ATF5Q9Y2D1 282 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 RAD54BQ9Y620 910 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 SEC24AO95486 1093 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 CDH18Q13634 790 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 TCP10LQ8TDR4 215 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 FNIP1Q8TF40 1166 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 ATXN2LQ8WWM7 1075 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 KLHL32Q96NJ5 620 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 FAM129BQ96TA1 746 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 ELOVL6Q9H5J4 265 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 PHF11Q9UIL8 331 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 SIK3Q9Y2K2 1263 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 MAP3K4Q9Y6R4 1608 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 KIAA0391O15091 583 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 OR1G1P47890 313 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 ITGA9Q13797 1035 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 DNAJC14Q6Y2X3 702 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 AKAP14Q86UN6 197 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 IGDCC4Q8TDY8 1250 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 MCUBQ9NWR8 336 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 AP4E1Q9UPM8 1137 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 COQ6Q9Y2Z9 468 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 AFF2P51816 1311 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 TCEA3O75764 348 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 TXNP10599 105 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 ITGA4P13612 1032 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 ZNF554Q86TJ5 538 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 TMEM132CQ8N3T6 1108 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 FAM81AQ8TBF8 368 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
GTF3C1-201ENST00000356183 TET3O43151 1660 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 ERVK-10P10266 1014 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 IL12AP29459 219 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 EIF2S3P41091 472 aaKnown RBP11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 NPY2RP49146 381 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 ZNF844Q08AG5 666 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 SPP2Q13103 211 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 DSG4Q86SJ6 1040 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 ATP6V0D2Q8N8Y2 350 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 AGAP11Q8TF27 550 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 ING3Q9NXR8 418 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 TMEM94Q12767 1356 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 BCLAF3A2AJT9 711 aaKnown RBP11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 C2CD2LO14523 706 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 MTSS1O43312 755 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 OR6A2O95222 327 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 GLP2RO95838 553 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 GPR107Q5VW38 600 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 ZFP1Q6P2D0 407 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 EXOC3L1Q86VI1 746 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 SNX32Q86XE0 403 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 CNPY3Q9BT09 278 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 MID1IP1Q9NPA3 183 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 ADPRHL2Q9NX46 363 aa11.27□□□□□ -0.6
GTF3C1-201ENST00000356183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 CES2O00748 559 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 SYNCRIPO60506 623 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 PROCP04070 461 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 CDH3P22223 829 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 CEBPGP53567 150 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 HSF2Q03933 536 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 EPS8Q12929 822 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 ZNF177Q13360 481 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 CUL2Q13617 745 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 PDK3Q15120 406 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 FBXO30Q8TB52 745 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 OTUD5Q96G74 571 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 CEP41Q9BYV8 373 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 MADDQ8WXG6 1647 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 RPN2P04844 631 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 MYBPC2Q14324 1141 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 TDRD10Q5VZ19 366 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 ULK3Q6PHR2 472 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 COLGALT1Q8NBJ5 622 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 GIPC3Q8TF64 312 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 CLPBQ9H078 707 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 NCKIPSDQ9NZQ3 722 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 ERVV-1B6SEH8 477 aa11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-201ENST00000356183 RNF44Q7L0R7 432 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms