RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TAB2Q9NYJ8 693 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 INTS6Q9UL03 887 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 TBL1XO60907 577 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 GRAP2O75791 330 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 LATS1O95835 1130 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 CYBBP04839 570 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 PRKCSHP14314 528 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 NUMBP49757 651 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 RING1Q06587 406 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 KCNJ12Q14500 433 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 MEA1Q16626 185 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 TPD52L1Q16890 204 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 PTPN20Q4JDL3 420 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 FSCBQ5H9T9 825 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 MMS22LQ6ZRQ5 1243 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 FAM183BPQ6ZVS7 135 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 CHST9Q7L1S5 443 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 ENOSF1Q7L5Y1 443 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 CYP2U1Q7Z449 544 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 CACUL1Q86Y37 369 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 CFAP52Q8N1V2 620 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 STK32AQ8WU08 396 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 PIGKQ92643 395 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 NAA15Q9BXJ9 866 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 CIPCQ9C0C6 399 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 STIM2Q9P246 746 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 PCDHGC3Q9UN70 934 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 TMEM131Q92545 1883 aa17.39■□□□□ 0.37
PDLIM7-201ENST00000355572 PLXNA2O75051 1894 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 CDX4O14627 284 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 IRAK2O43187 625 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 MOCS2O96007 188 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 TFE3P19532 575 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 IRAK1P51617 712 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 LIMK1P53667 647 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 DRAP1Q14919 205 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 ZC3H12AQ5D1E8 599 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 KIAA1324Q6UXG2 1013 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 NUDT18Q6ZVK8 323 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 FAM71AQ8IYT1 594 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 MYO19Q96H55 970 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 SPACA7Q96KW9 195 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 EDEM2Q9BV94 578 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 SLC2A11Q9BYW1 496 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 GGA2Q9UJY4 613 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 TLR6Q9Y2C9 796 aa17.38■□□□□ 0.37
PDLIM7-201ENST00000355572 NCOR2Q9Y618 2525 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 EPHB6O15197 1021 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 MAP3K13O43283 966 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 MED7O43513 233 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 TRUB2O95900 331 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 PABPC1P11940 636 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 ACADSBP45954 432 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 FOXK2Q01167 660 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 RPL6Q02878 288 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 LMAN2Q12907 356 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 TCP11X2Q5H9J9 407 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 MS4A13Q5J8X5 152 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 PPM1JQ5JR12 505 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 CDKAL1Q5VV42 579 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 OLFML1Q6UWY5 402 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 LPCAT2Q7L5N7 544 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 DEFB106AQ8N104 65 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 SERPINB11Q96P15 392 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 LSM14BQ9BX40 385 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 GANQ9H2C0 597 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 TMEM245Q9H330 911 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 ANLNQ9NQW6 1124 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 PILRBQ9UKJ0 227 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 NFE2L3Q9Y4A8 694 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 DOCK4Q8N1I0 1966 aa17.37■□□□□ 0.37
PDLIM7-201ENST00000355572 C4orf47A7E2U8 309 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 I6L893 689 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 GGCXP38435 758 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 DCAF6Q58WW2 860 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 KLHDC7AQ5VTJ3 777 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 PEAR1Q5VY43 1037 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 RAP1GAP2Q684P5 730 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 NUGGCQ68CJ6 796 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 MBLAC2Q68D91 279 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 SDE2Q6IQ49 451 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 CIR1Q86X95 450 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 DDX1Q92499 740 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 AZIN2Q96A70 460 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 PPP1R13BQ96KQ4 1090 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 SLC2A13Q96QE2 648 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 PRMT1Q99873 361 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 POPDC2Q9HBU9 364 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 USP36Q9P275 1121 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 SLCO1B1Q9Y6L6 691 aa17.36■□□□□ 0.37
PDLIM7-201ENST00000355572 DOCK9Q9BZ29 2069 aa17.35■□□□□ 0.37
PDLIM7-201ENST00000355572 CNOT1A5YKK6 2376 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-201ENST00000355572 SYNJ2BP-COX16A0A087WUM0 186 aa17.35■□□□□ 0.37
PDLIM7-201ENST00000355572 GIPC1O14908 333 aa17.35■□□□□ 0.37
PDLIM7-201ENST00000355572 EPHX1P07099 455 aa17.35■□□□□ 0.37
PDLIM7-201ENST00000355572 SDHBP21912 280 aa17.35■□□□□ 0.37
PDLIM7-201ENST00000355572 MAOBP27338 520 aa17.35■□□□□ 0.37
PDLIM7-201ENST00000355572 CTSOP43234 321 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms