RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 IFFO1Q0D2I5 559 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 CBLBQ13191 982 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 TTMPQ5BVD1 217 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 FAM117BQ6P1L5 589 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 STKLD1Q8NE28 680 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 OR2W6PQ8NHA6 318 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 SLC39A13Q96H72 371 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 RBM15Q96T37 977 aaKnown RBP eCLIP23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 CLSTN3Q9BQT9 956 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 STK39Q9UEW8 545 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 ALPK3Q96L96 1907 aa23.58■■□□□ 1.37
SCAMP3-202ENST00000355379 KCNU1A8MYU2 1149 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 PPP1R12AO14974 1030 aaPredicted RBP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 EIF3HO15372 352 aaKnown RBP eCLIP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 NCAM2O15394 837 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 ABLIM3O94929 683 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 ZDHHC11BP0C7U3 371 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 SLC2A3P11169 496 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 NRG1Q02297 640 aaPredicted RBP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 GABPB1Q06547 395 aaPredicted RBP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 TAF10Q12962 218 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 PPIGQ13427 754 aaKnown RBP eCLIP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 PRKD1Q15139 912 aaPredicted RBP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 HEATR6Q6AI08 1181 aaKnown RBP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 B4GALNT4Q76KP1 1039 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 TMCO2Q7Z6W1 182 aaPredicted RBP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 ZNF276Q8N554 614 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 GPR152Q8TDT2 470 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 NINJ2Q9NZG7 142 aa23.58■■□□□ 1.36
SCAMP3-202ENST00000355379 HMGB1P1B2RPK0 211 aaPredicted RBP23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 CHADO15335 359 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 LRIG2O94898 1065 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 MAP3K6O95382 1288 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 ATF6P18850 670 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 PPM1AP35813 382 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 MAGEA4P43358 317 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 MAGEA6P43360 314 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 AGBL2Q5U5Z8 902 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 CENPUQ71F23 418 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 PWWP2AQ96N64 755 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 YME1L1Q96TA2 773 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 FERMT1Q9BQL6 677 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 BRD8Q9H0E9 1235 aa23.57■■□□□ 1.36
SCAMP3-202ENST00000355379 GOLGA6CA6NDK9 693 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 GOLGA6DP0CG33 693 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 RPL17P18621 184 aaKnown RBP23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 HOXC13P31276 330 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 SERPINB6P35237 376 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 KCNJ11Q14654 390 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 MANEALQ5VSG8 457 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 ZNF461Q8TAF7 563 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 HTR3CQ8WXA8 447 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 OVCA2Q8WZ82 227 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 ATP6V1G3Q96LB4 118 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 C1orf74Q96LT6 269 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 TTC25Q96NG3 672 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 FRMD8Q9BZ67 464 aaPredicted RBP23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 ROPN1BQ9BZX4 212 aaPredicted RBP23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 UBE2OQ9C0C9 1292 aaKnown RBP23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 ROPN1Q9HAT0 212 aaPredicted RBP23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 GOLGA6AQ9NYA3 693 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 SNX10Q9Y5X0 201 aa23.56■■□□□ 1.36
SCAMP3-202ENST00000355379 KIAA0100Q14667 2235 aaKnown RBP23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 ALOX15BO15296 676 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 MSI1O43347 362 aaKnown RBP23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 PAGE1O75459 146 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 FGBP02675 491 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 SHBGP04278 402 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 ARL4CP56559 192 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 BASP1P80723 227 aaKnown RBP23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 HTRA4P83105 476 aaPredicted RBP23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 RAB33AQ14088 237 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 ANKRD22Q5VYY1 191 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 PPP1R21Q6ZMI0 780 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 C16orf59Q7L2K0 433 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 OTOP2Q7RTS6 562 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 FCRL2Q96LA5 508 aaPredicted RBP23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 KLC2Q9H0B6 622 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 SAYSD1Q9NPB0 183 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 DNAJC17Q9NVM6 304 aaKnown RBP23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 MAFFQ9ULX9 164 aa23.55■■□□□ 1.36
SCAMP3-202ENST00000355379 E7ESA3 106 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 C2CD2LO14523 706 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 URODP06132 367 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 ABHD2P08910 425 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 VAV1P15498 845 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 EPHB2P29323 1055 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 NRLP54845 237 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 TBX4P57082 545 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 TRIP4Q15650 581 aaPredicted RBP23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 HIF1AQ16665 826 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 KYNUQ16719 465 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 RASIP1Q5U651 963 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 PDZD8Q8NEN9 1154 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 GIPC2Q8TF65 315 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 CDK5RAP1Q96SZ6 601 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 RAB6BQ9NRW1 208 aa23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 XPO7Q9UIA9 1087 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-202ENST00000355379 NUDT5Q9UKK9 219 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms