RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 MTA2O94776 668 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 ADRA1BP35368 520 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 SGSHP51688 502 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 PIGHQ14442 188 aaPredicted RBP22.96■■□□□ 1.27
SHMT1-203ENST00000354098 CPXM2Q8N436 756 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 CHFRQ96EP1 664 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 PRMT1Q99873 361 aaKnown RBP22.96■■□□□ 1.27
SHMT1-203ENST00000354098 SIK2Q9H0K1 926 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 PLK2Q9NYY3 685 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 PCSK1NQ9UHG2 260 aa22.96■■□□□ 1.27
SHMT1-203ENST00000354098 GFRA2O00451 464 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 DCXO43602 365 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 TCF4P15884 667 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 DESP17661 470 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 MIPP30301 263 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 GJA4P35212 333 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 NOP2P46087 812 aaKnown RBP22.95■■□□□ 1.26
SHMT1-203ENST00000354098 GAB4Q2WGN9 574 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 ANO4Q32M45 955 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 NIPA2Q8N8Q9 360 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 PEBP4Q96S96 227 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 TMEM51Q9NW97 253 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 TRIM10Q9UDY6 481 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 FBXL21Q9UKT6 434 aa22.95■■□□□ 1.26
SHMT1-203ENST00000354098 TMEM110-MUSTN1A8MSY1 372 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 PJA2O43164 708 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 ADH5P11766 374 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 TACR2P21452 398 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 MESDQ14696 234 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 ACAP1Q15027 740 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 NAIF1Q69YI7 327 aaPredicted RBP22.94■■□□□ 1.26
SHMT1-203ENST00000354098 C14orf80Q86SX3 495 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 CHSY1Q86X52 802 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 PRICKLE1Q96MT3 831 aaPredicted RBP22.94■■□□□ 1.26
SHMT1-203ENST00000354098 WNT16Q9UBV4 365 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 PIAS3Q9Y6X2 628 aa22.94■■□□□ 1.26
SHMT1-203ENST00000354098 KRBA1A5PL33 1030 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 NEDD8-MDP1E9PL57 170 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 NRDCO43847 1150 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 PROSCO94903 275 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 ADH1CP00326 375 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 MLLT6P55198 1093 aaPredicted RBP22.93■■□□□ 1.26
SHMT1-203ENST00000354098 NR1H3Q13133 447 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 AUHQ13825 339 aaKnown RBP22.93■■□□□ 1.26
SHMT1-203ENST00000354098 SLFN11Q7Z7L1 901 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 LGI2Q8N0V4 545 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 EDAQ92838 391 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 BBS2Q9BXC9 721 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 NCOR1O75376 2440 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 A0A0A6YYK5 440 aaPredicted RBP22.93■■□□□ 1.26
SHMT1-203ENST00000354098 SHISA7A6NL88 538 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 BUB1O43683 1085 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 IL1R2P27930 398 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 GAD2Q05329 585 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 ARL13BQ3SXY8 428 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 FYB2Q5VWT5 728 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 FBXL22Q6P050 247 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 CYP4V2Q6ZWL3 525 aaPredicted RBP22.93■■□□□ 1.26
SHMT1-203ENST00000354098 CFAP52Q8N1V2 620 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 NAT16Q8N8M0 369 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 DDI1Q8WTU0 396 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 NTAN1Q96AB6 310 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 TMA16Q96EY4 203 aaKnown RBP22.93■■□□□ 1.26
SHMT1-203ENST00000354098 HAPLN3Q96S86 360 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 DDX50Q9BQ39 737 aaKnown RBP22.93■■□□□ 1.26
SHMT1-203ENST00000354098 MARK1Q9P0L2 795 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 VANGL2Q9ULK5 521 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 FZD10Q9ULW2 581 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 USP18Q9UMW8 372 aa22.93■■□□□ 1.26
SHMT1-203ENST00000354098 SPECC1L-ADORA2AF8WAN1 911 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 TYRP14679 529 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 CD72P21854 359 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 PCK1P35558 622 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 HADHBP55084 474 aaKnown RBP22.92■■□□□ 1.26
SHMT1-203ENST00000354098 MLF2Q15773 248 aaPredicted RBP22.92■■□□□ 1.26
SHMT1-203ENST00000354098 TXNDC11Q6PKC3 985 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 C12orf40Q86WS4 652 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 SIX5Q8N196 739 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 PYROXD2Q8N2H3 581 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 C1orf74Q96LT6 269 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 ARHGEF3Q9NR81 526 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 GPATCH2LQ9NWQ4 482 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 MYOFQ9NZM1 2061 aa22.92■■□□□ 1.26
SHMT1-203ENST00000354098 BTNL10A8MVZ5 291 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 F5H5T6 163 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 HOXC11O43248 304 aaPredicted RBP22.91■■□□□ 1.26
SHMT1-203ENST00000354098 PENKP01210 267 aaPredicted RBP22.91■■□□□ 1.26
SHMT1-203ENST00000354098 CTHP32929 405 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 ARHGAP25P42331 645 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 SLC6A11P48066 632 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 RPS24P62847 133 aaKnown RBP22.91■■□□□ 1.26
SHMT1-203ENST00000354098 KIF5AQ12840 1032 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 MTA1Q13330 715 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 MPPE1Q53F39 396 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 ARTNQ5T4W7 220 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 TXNRD3NBQ6F5E7 133 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 TPRG1Q6ZUI0 275 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 IGSF8Q969P0 613 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 GOLPH3Q9H4A6 298 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 CLEC4EQ9ULY5 219 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms