RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CYP4F11Q9HBI6 524 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 SRRM3A6NNA2 597 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 KCNE1P15382 129 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 CHRNB2P17787 502 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 MGAT5Q09328 741 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 ILDR2Q71H61 639 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 EFL1Q7Z2Z2 1120 aaKnown RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 MYCBPAPQ8TBZ2 947 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 FGD4Q96M96 766 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 C2orf81A6NN90 581 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 FAM107AO95990 144 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 UNGP13051 313 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 PRKCZQ05513 592 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 STX3Q13277 289 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 HIBCHQ6NVY1 386 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 KIAA2013Q8IYS2 634 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 MCUQ8NE86 351 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 CCDC126Q96EE4 140 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 CCT8L2Q96SF2 557 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 SNRNP25Q9BV90 132 aaKnown RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 USP17L7P0C7H9 530 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 PGAM1P18669 254 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 DPYSL3Q14195 570 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 SLC44A4Q53GD3 710 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 TAS2R42Q7RTR8 314 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 ART4Q93070 314 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 PCYT2Q99447 389 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 CACYBPQ9HB71 228 aaKnown RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 APOBEC3GQ9HC16 384 aaKnown RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 ACP6Q9NPH0 428 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 USP15Q9Y4E8 981 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 RAMP2O60895 175 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 CNMDO75829 334 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 CRTAMO95727 393 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 IRF1P10914 325 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 PAX7P23759 505 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 INTS6LQ5JSJ4 861 aaKnown RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 FAM47EQ6ZV65 393 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 MIB1Q86YT6 1006 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 PARP9Q8IXQ6 854 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 DCUN1D1Q96GG9 259 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 ZBTB18Q99592 522 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 PRMT1Q99873 361 aaKnown RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 PPARGC1AQ9UBK2 798 aaKnown RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 RPS6KL1Q9Y6S9 549 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 ADGRA3Q8IWK6 1321 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 A0A0G2JND7 137 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 BNIP3LO60238 219 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 FGF19O95750 216 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 LAG3P18627 525 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 ASPAP45381 313 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 MARC1Q5VT66 337 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 SLC39A4Q6P5W5 647 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 MON1AQ86VX9 555 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 SPATA13Q96N96 652 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 TKTL2Q9H0I9 626 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 MTO1Q9Y2Z2 717 aaKnown RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 TCP11X1B4DZS4 312 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 F5H423 210 aaPredicted RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 XYLBO75191 536 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 RGS20O76081 388 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 AMPD1P23109 780 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 TUBP50607 506 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 DNAJC3Q13217 504 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 RCN2Q14257 317 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 FASTKD1Q53R41 847 aaKnown RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 TTC23LQ6PF05 361 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 METTL3Q86U44 580 aaKnown RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 EFHD1Q9BUP0 239 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 CHST7Q9NS84 486 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 STXBP5LQ9Y2K9 1186 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 PKP3Q9Y446 797 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 C2CD2LO14523 706 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 MDM4O15151 490 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 ELNP15502 786 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 ATP4AP20648 1035 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 RETSATQ6NUM9 610 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 MAGEB18Q96M61 343 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 VRTNQ9H8Y1 702 aa12.49□□□□□ -0.41
SMAD9-201ENST00000350148 MRPL17Q9NRX2 175 aaKnown RBP12.49□□□□□ -0.41
SMAD9-201ENST00000350148 TAF1P21675 1872 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 JCHAINP01591 159 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 RALBP11234 206 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms