RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 MAP3K6O95382 1288 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FAM107AO95990 144 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 GSTA2P09210 222 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 OR4Q2P0C623 313 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 CHN1P15882 459 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 CREB1P16220 341 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ERCC2P18074 760 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 IBSPP21815 317 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 KCNA4P22459 653 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 SSTR1P30872 391 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 HTR7P34969 479 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 PHBP35232 272 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FDFT1P37268 417 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ELK3P41970 407 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 SLC11A1P49279 550 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 PGFP49763 221 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 GATMP50440 423 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 SLC18A1P54219 525 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 YWHAGP61981 247 aaKnown RBP eCLIP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 CDK16Q00536 496 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 NRG1Q02297 640 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 GALNT2Q10471 571 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 WASHC5Q12768 1159 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 MTFR1Q15390 333 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ARL13BQ3SXY8 428 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 BBS9Q3SYG4 887 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 BRMS1LQ5PSV4 323 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ANKRD20A2Q5SQ80 823 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 VARS2Q5ST30 1063 aaKnown RBP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ANKRD20A1Q5TYW2 823 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 MANEALQ5VSG8 457 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ANKRD20A3Q5VUR7 823 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FOXR1Q6PIV2 292 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ADGRD1Q6QNK2 874 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 PDZD4Q76G19 769 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 TRABD2AQ86V40 505 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 NLRP14Q86W24 1093 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 NPAS4Q8IUM7 802 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 KLHDC8BQ8IXV7 354 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 VPS52Q8N1B4 723 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FBXO36Q8NEA4 188 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 SCAMP5Q8TAC9 235 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ADAM32Q8TC27 787 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 BCAS4Q8TDM0 211 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 PYROXD1Q8WU10 500 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 HTR3CQ8WXA8 447 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 EDEM1Q92611 657 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 DPF3Q92784 378 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 LRRC39Q96DD0 335 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 P2RY11Q96G91 374 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 TOX2Q96NM4 488 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ZNF317Q96PQ6 595 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FAM193BQ96PV7 902 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 HAPLN3Q96S86 360 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 GPR62Q9BZJ7 368 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 CRISPLD2Q9H0B8 497 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 PRDM12Q9H4Q4 367 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 WDCPQ9H6R7 721 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 VPS37BQ9H9H4 285 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 NMUR1Q9HB89 426 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 PLAC1Q9HBJ0 212 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ABCC13Q9NSE7 274 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 IGSF9Q9P2J2 1179 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 ADAM28Q9UKQ2 775 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 SCML2Q9UQR0 700 aa7.14□□□□□ -1.27
TRIM55-203ENST00000350034 PRG3Q9Y2Y8 225 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-203ENST00000350034 SYNJ2BP-COX16A0A087WUM0 186 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 TMEM120BA0PK00 339 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 KCNU1A8MYU2 1149 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
TRIM55-203ENST00000350034 PPP1R12AO14974 1030 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-203ENST00000350034 TRIM66O15016 1216 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 NCAM2O15394 837 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 CREB3O43889 395 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 LRIG2O94898 1065 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 VNN2O95498 520 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 ALDH2P05091 517 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 GALTP07902 379 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 MLNP12872 115 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 CCL5P13501 91 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 DRD4P21917 467 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 GRIK1P39086 918 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 SEC24CP53992 1094 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 GEMIN4P57678 1058 aaKnown RBP7.13□□□□□ -1.27
TRIM55-203ENST00000350034 TPI1P60174 286 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 ZNF33AQ06730 810 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 PPIDQ08752 370 aaKnown RBP7.13□□□□□ -1.27
TRIM55-203ENST00000350034 SMARCB1Q12824 385 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 ELAVL2Q12926 359 aaKnown RBP7.13□□□□□ -1.27
TRIM55-203ENST00000350034 MPP2Q14168 576 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 PPP2R5DQ14738 602 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 SKIDA1Q1XH10 827 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 PARP6Q2NL67 630 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 KLHL38Q2WGJ6 581 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 CTXN3Q4LDR2 81 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 SLC39A12Q504Y0 691 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 HP1BP3Q5SSJ5 553 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-203ENST00000350034 FAXCQ5TGI0 409 aa7.13□□□□□ -1.27
TRIM55-203ENST00000350034 FAM171A1Q5VUB5 890 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms