RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SIK2Q9H0K1 926 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 SMARCAL1Q9NZC9 954 aa19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 USP15Q9Y4E8 981 aaPredicted RBP19.69■□□□□ 0.74
CHMP4A-201ENST00000347519 SLC2A3P11169 496 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 KCNA5P22460 613 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 IL4RP24394 825 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 AVPR1AP37288 418 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 MTHFRP42898 656 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 AIF1P55008 147 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 SEMA3BQ13214 749 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 DPYSL3Q14195 570 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 SKIV2LQ15477 1246 aaKnown RBP19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 TAZQ16635 292 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 ARL13BQ3SXY8 428 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 FAM78AQ5JUQ0 283 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 NUGGCQ68CJ6 796 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 SPOCD1Q6ZMY3 1216 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 Q6ZNB5 142 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 ATP6V0D2Q8N8Y2 350 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 KCTD6Q8NC69 237 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 TSC1Q92574 1164 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 LRRC3BQ96PB8 259 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 HAPLN3Q96S86 360 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 OSBPL2Q9H1P3 480 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 TDP1Q9NUW8 608 aa19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 AGO1Q9UL18 857 aaKnown RBP19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 SPTBN5Q9NRC6 3674 aaKnown RBP19.68■□□□□ 0.74
CHMP4A-201ENST00000347519 ACSL4O60488 711 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 ZRANB2O95218 330 aaKnown RBP eCLIP19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 SLC6A4P31645 630 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 KRT81Q14533 505 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 FAM133BQ5BKY9 247 aaKnown RBP19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 PPP6R3Q5H9R7 873 aaPredicted RBP19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 MS4A13Q5J8X5 152 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 PSTKQ8IV42 348 aaKnown RBP19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 UNC45BQ8IWX7 931 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 ZNF683Q8IZ20 524 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 RCOR2Q8IZ40 523 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 KIF18AQ8NI77 898 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 UBE2Q2Q8WVN8 375 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 BTN2A3PQ96KV6 586 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 PRMT1Q99873 361 aaKnown RBP19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 CARD9Q9H257 536 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 CWC15Q9P013 229 aaKnown RBP19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 CDH7Q9ULB5 785 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 SAR1BQ9Y6B6 198 aa19.67■□□□□ 0.74
CHMP4A-201ENST00000347519 CEP104O60308 925 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 URI1O94763 535 aaPredicted RBP19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 KRT10P13645 584 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 PRLRP16471 622 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 GOT1P17174 413 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 VIPR2P41587 438 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 CDKN2BP42772 138 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 HARS2P49590 506 aaKnown RBP19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 IRAK1P51617 712 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 MLLT6P55198 1093 aaPredicted RBP19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 ADCY2Q08462 1091 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 USP4Q13107 963 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 ZNF77Q15935 545 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 RAP1GAP2Q684P5 730 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 MAFAQ8NHW3 353 aaPredicted RBP19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 PBKQ96KB5 322 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 ASB16Q96NS5 453 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 TMEM51Q9NW97 253 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 OR12D3Q9UGF7 316 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 ZMYM5Q9UJ78 669 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 NEU3Q9UQ49 428 aa19.66■□□□□ 0.74
CHMP4A-201ENST00000347519 C5orf42Q9H799 3197 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 TCRBV7S2A1N4TA0A589 114 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 TRDMT1O14717 391 aaKnown RBP19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 MBTPS2O43462 519 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 CREB3O43889 395 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 LRIG2O94898 1065 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 TCP1P17987 556 aaKnown RBP19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 FCARP24071 287 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 WEE1P30291 646 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 AUHQ13825 339 aaKnown RBP19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 PDK2Q15119 407 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 MANEALQ5VSG8 457 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 HTR3DQ70Z44 454 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 CCDC50Q8IVM0 306 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 AZIN2Q96A70 460 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 P2RY11Q96G91 374 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 RBM41Q96IZ5 413 aaKnown RBP19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 CAPZA3Q96KX2 299 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 HEMGNQ9BXL5 484 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 CALN1Q9BXU9 219 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 GDE1Q9NZC3 331 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 SLC12A6Q9UHW9 1150 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 SH3BP1Q9Y3L3 701 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 DOCK4Q8N1I0 1966 aa19.65■□□□□ 0.74
CHMP4A-201ENST00000347519 hCG_1818297A0A087WSY0 165 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 PDE2AO00408 941 aaPredicted RBP19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 TACR2P21452 398 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 AMPD1P23109 780 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 RFWD3Q6PCD5 774 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 CREG2Q8IUH2 290 aa19.64■□□□□ 0.73
CHMP4A-201ENST00000347519 BBS7Q8IWZ6 715 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms