RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LRRC8DQ7L1W4 858 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 KRT78Q8N1N4 520 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 STX19Q8N4C7 294 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 IPMKQ8NFU5 416 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SH3GL2Q99962 352 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SMPD4Q9NXE4 827 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 NCDNQ9UBB6 729 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 AAR2Q9Y312 384 aaKnown RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CYP3A7-CYP3A51PA0A087WV96 503 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 KRT34O76011 436 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CYP3A7P24462 503 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ATP5C1P36542 298 aaKnown RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 MAPK8P45983 427 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CRYBB1P53674 252 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ZCWPW2Q504Y3 356 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 DUPD1Q68J44 220 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 RNF135Q8IUD6 432 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 PAFAH2Q99487 392 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 RANBP17Q9H2T7 1088 aaKnown RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 RGPD5Q99666 1765 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SETD1AO15047 1707 aaKnown RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 KCNJ2P63252 427 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CCNG2Q16589 344 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 GET4Q7L5D6 327 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CLYBLQ8N0X4 340 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SLC25A41Q8N5S1 370 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 PCDHB18PQ96TA0 734 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 C2orf49Q9BVC5 232 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CACNA2D2Q9NY47 1150 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SFMBT1Q9UHJ3 866 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 TRMT6Q9UJA5 497 aaKnown RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CRYL1Q9Y2S2 319 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 M0R2N6 131 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CCDC22O60826 627 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CBX6O95503 412 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CLTBP09497 229 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ITGAXP20702 1163 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ELF3P78545 371 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CAMKK1Q8N5S9 505 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ZSCAN18Q8TBC5 510 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ZMYM5Q9UJ78 669 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ACKR2O00590 384 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 HDCP19113 662 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 DRD4P21917 467 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 GRIK3Q13003 919 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 BMPR2Q13873 1038 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ACOX1Q15067 660 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 MAPRE2Q15555 327 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SLC39A12Q504Y0 691 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 TFDP3Q5H9I0 405 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SPDYAQ5MJ70 313 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ZBTB41Q5SVQ8 909 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ERMARDQ5T6L9 678 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CHMP1BQ7LBR1 199 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 ACOT1Q86TX2 421 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 DDIASQ8IXT1 998 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 HSD17B14Q9BPX1 270 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CLPBQ9H078 707 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 PIH1D1Q9NWS0 290 aaKnown RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SOHLH2Q9NX45 425 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 VAV3Q9UKW4 847 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 GIT1Q9Y2X7 761 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 E2F6O75461 281 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 RHOBTB1O94844 696 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 RPL9P32969 192 aaKnown RBP11.16□□□□□ -0.62
CLCN6-202ENST00000346436 MAP3K7CLP57077 242 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 CNGA2Q16280 664 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 ACTL9Q8TC94 416 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 DNAJC9Q8WXX5 260 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 PGM2Q96G03 612 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 PDGFCQ9NRA1 345 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.16□□□□□ -0.62
CLCN6-202ENST00000346436 F8VP50 259 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 SLC2A4P14672 509 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 BGNP21810 368 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 GTF2E2P29084 291 aaKnown RBP11.16□□□□□ -0.62
CLCN6-202ENST00000346436 AP2B1P63010 937 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 FMO1Q01740 532 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 PDE1CQ14123 709 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-202ENST00000346436 PRPF39Q86UA1 669 aaKnown RBP11.16□□□□□ -0.62
CLCN6-202ENST00000346436 CPNE8Q86YQ8 564 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 MTMR14Q8NCE2 650 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 ATP13A1Q9HD20 1204 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 ELOVL2Q9NXB9 296 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 STX3Q13277 289 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 RRP1BQ14684 758 aaKnown RBP11.16□□□□□ -0.62
CLCN6-202ENST00000346436 RCN1Q15293 331 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 UGCGQ16739 394 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 TAGAPQ8N103 731 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 KAT2BQ92831 832 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 WWP1Q9H0M0 922 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 CISHQ9NSE2 258 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 TNFSF13BQ9Y275 285 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 DDX3YO15523 660 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms