RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 DPYSQ14117 519 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 STEAP4Q687X5 459 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 PSTKQ8IV42 348 aaKnown RBP15.91■□□□□ 0.14
UPF3B-202ENST00000345865 INPP5DQ92835 1189 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 TSPAN18Q96SJ8 248 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 C20orf27Q9GZN8 174 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 IQCGQ9H095 443 aaKnown RBP15.91■□□□□ 0.14
UPF3B-202ENST00000345865 LRRC4Q9HBW1 653 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 FAM237BA0A1B0GVD1 139 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 KLF11O14901 512 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 KRT38O76015 456 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 PSMB4P28070 264 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 ARFIP2P53365 341 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 SESN2P58004 480 aaPredicted RBP15.91■□□□□ 0.14
UPF3B-202ENST00000345865 FKBP1BP68106 108 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 SMAD1Q15797 465 aaKnown RBP15.91■□□□□ 0.14
UPF3B-202ENST00000345865 SPDYAQ5MJ70 313 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 LGSNQ5TDP6 509 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 NDUFAF2Q8N183 169 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 ZNF567Q8N184 647 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 C3orf58Q8NDZ4 430 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 ZMIZ2Q8NF64 920 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 DEPDC1BQ8WUY9 529 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 SKA1Q96BD8 255 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 SENP8Q96LD8 212 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 SMOQ99835 787 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 MED10Q9BTT4 135 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 ULBP1Q9BZM6 244 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
UPF3B-202ENST00000345865 KRT82Q9NSB4 513 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 ARL8BQ9NVJ2 186 aa15.91■□□□□ 0.14
UPF3B-202ENST00000345865 DDX43Q9NXZ2 648 aaKnown RBP15.91■□□□□ 0.14
UPF3B-202ENST00000345865 NUP205Q92621 2012 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MYBPHLA2RUH7 354 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 TRAFD1O14545 582 aaPredicted RBP15.9■□□□□ 0.14
UPF3B-202ENST00000345865 ALDH1A2O94788 518 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 IL1BP01584 269 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 GM2AP17900 193 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MGAT1P26572 445 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 FDFT1P37268 417 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MLH1P40692 756 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 GLUD2P49448 558 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 PURAQ00577 322 aaKnown RBP15.9■□□□□ 0.14
UPF3B-202ENST00000345865 DEUP1Q05D60 604 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 BST1Q10588 318 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 CASC4Q6P4E1 433 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 LRRC8BQ6P9F7 803 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 TTC7BQ86TV6 843 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 C2orf69Q8N8R5 385 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 CCNYQ8ND76 341 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 FAM13CQ8NE31 585 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 WNT8BQ93098 351 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 RAB3IPQ96QF0 476 aaPredicted RBP15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MIPEPQ99797 713 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 EBF2Q9HAK2 575 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 WDR6Q9NNW5 1121 aaKnown RBP15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MKS1Q9NXB0 559 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 IL1RAPL1Q9NZN1 696 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 SEPT10Q9P0V9 454 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 SIRPGQ9P1W8 387 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 BPTFQ12830 3046 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 H3BRJ5 948 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 DCLK1O15075 740 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MYL2P10916 166 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 SLC8A3P57103 927 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 NIPAL4Q0D2K0 466 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 PAFAH1B3Q15102 231 aaKnown RBP15.9■□□□□ 0.14
UPF3B-202ENST00000345865 FSCN1Q16658 493 aaKnown RBP15.9■□□□□ 0.14
UPF3B-202ENST00000345865 BSPRYQ5W0U4 402 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 RFX8Q6ZV50 586 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 LONP2Q86WA8 852 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 SIX6OS1Q8N1H7 587 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 NME8Q8N427 588 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 SLC7A14Q8TBB6 771 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 LPPQ93052 612 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MTBPQ96DY7 904 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 GAD1Q99259 594 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 GORASP1Q9BQQ3 440 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 PAAF1Q9BRP4 392 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 SAR1AQ9NR31 198 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 MCM8Q9UJA3 840 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 PSAT1Q9Y617 370 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 TRPM7Q96QT4 1865 aa15.9■□□□□ 0.14
UPF3B-202ENST00000345865 CCDC195A0A1B0GUA6 201 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 SDR42E2A6NKP2 422 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 KCNK1O00180 336 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 ANP32DO95626 131 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 GSRP00390 522 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 MLNP12872 115 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 EZRP15311 586 aaKnown RBP15.89■□□□□ 0.13
UPF3B-202ENST00000345865 CRHR1P34998 444 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 ADRA1BP35368 520 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 CLCNKBP51801 687 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 CDK16Q00536 496 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 IRF5Q13568 498 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 TEX44Q53QW1 395 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 CYS1Q717R9 158 aa15.89■□□□□ 0.13
UPF3B-202ENST00000345865 BZW1Q7L1Q6 419 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms