RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FBXO21O94952 628 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 GJB6O95452 261 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 CALB1P05937 261 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 MMP8P22894 467 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 RRM1P23921 792 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
TPM4-202ENST00000344824 PTP4A2Q12974 167 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 GAB4Q2WGN9 574 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 FBXO43Q4G163 708 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 C2orf27AQ580R0 203 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 OR6B2Q6IFH4 312 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 PPP1R2P3Q6NXS1 205 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 DENND1CQ8IV53 801 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 KIAA1958Q8N8K9 716 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 IRGQQ8WZA9 623 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 TRIM11Q96F44 468 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 PNKPQ96T60 521 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 DCLK3Q9C098 648 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 POLR3BQ9NW08 1133 aaPredicted RBP14.35□□□□□ -0.11
TPM4-202ENST00000344824 PLK2Q9NYY3 685 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 CTTNBP2NLQ9P2B4 639 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 INTUQ9ULD6 942 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 SLC8A2Q9UPR5 921 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 RALGAPA1Q6GYQ0 2036 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.34□□□□□ -0.11
TPM4-202ENST00000344824 CAPN9O14815 690 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 GABBR2O75899 941 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 KAT7O95251 611 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 MOCS3O95396 460 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 NCAM1P13591 858 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 ACADSBP45954 432 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 Q6ZNB5 142 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 FAM183BPQ6ZVS7 135 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 EZH1Q92800 747 aaPredicted RBP14.34□□□□□ -0.11
TPM4-202ENST00000344824 ACDQ96AP0 544 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 PLD4Q96BZ4 506 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 C18orf8Q96DM3 657 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
TPM4-202ENST00000344824 HHIPQ96QV1 700 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 HINFPQ9BQA5 517 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 NUP85Q9BW27 656 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 ZDHHC4Q9NPG8 344 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 DNAJC17Q9NVM6 304 aaKnown RBP14.34□□□□□ -0.11
TPM4-202ENST00000344824 SALL4Q9UJQ4 1053 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 WDR87Q6ZQQ6 2873 aa14.34□□□□□ -0.11
TPM4-202ENST00000344824 GOLGA6L9A6NEM1 432 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 ANTXRLA6NF34 631 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 CHURC1-FNTBB4DL54 471 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 SART1O43290 800 aaKnown RBP14.33□□□□□ -0.11
TPM4-202ENST00000344824 GREM1O60565 184 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 ATG13O75143 517 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 TULP3O75386 442 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 CYP1A2P05177 515 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 MYBL1P10243 752 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 TYRP14679 529 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 HOXC13P31276 330 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 TIE1P35590 1138 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 PXNP49023 591 aaPredicted RBP14.33□□□□□ -0.11
TPM4-202ENST00000344824 FNTBP49356 437 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 MESP2Q0VG99 397 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 ZNF528Q3MIS6 628 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 DNAJC24Q6P3W2 148 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 XYLT1Q86Y38 959 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 SFTPA1Q8IWL2 248 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 SCML4Q8N228 414 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 ZNF276Q8N554 614 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 SLC35G2Q8TBE7 412 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 RFFLQ8WZ73 363 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 C16orf45Q96MC5 204 aaPredicted RBP14.33□□□□□ -0.11
TPM4-202ENST00000344824 SLC4A5Q9BY07 1137 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 IRX2Q9BZI1 471 aaPredicted RBP14.33□□□□□ -0.11
TPM4-202ENST00000344824 OSGEPQ9NPF4 335 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 KCND1Q9NSA2 647 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 ZSCAN32Q9NX65 697 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 DEC1Q9P2X7 70 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.11
TPM4-202ENST00000344824 ZNF510Q9Y2H8 683 aa14.33□□□□□ -0.11
TPM4-202ENST00000344824 SDK1Q7Z5N4 2213 aa14.33□□□□□ -0.12
TPM4-202ENST00000344824 TBC1D3BA6NDS4 549 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 PRR23AA6NEV1 266 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 TMEM110-MUSTN1A8MSY1 372 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 TRIM24O15164 1050 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 HOXC11O43248 304 aaPredicted RBP14.32□□□□□ -0.12
TPM4-202ENST00000344824 TSPAN3O60637 253 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 KLKB1P03952 638 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
TPM4-202ENST00000344824 HARS2P49590 506 aaKnown RBP14.32□□□□□ -0.12
TPM4-202ENST00000344824 DMWDQ09019 674 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 FAM102AQ5T9C2 384 aaPredicted RBP14.32□□□□□ -0.12
TPM4-202ENST00000344824 PRR23BQ6ZRT6 265 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 ASCL5Q7RTU5 278 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 CCDC33Q8N5R6 958 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 ZNF564Q8TBZ8 553 aaPredicted RBP14.32□□□□□ -0.12
TPM4-202ENST00000344824 ADAM32Q8TC27 787 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 STK32AQ8WU08 396 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 VCPIP1Q96JH7 1222 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 BTBD6Q96KE9 485 aa14.32□□□□□ -0.12
TPM4-202ENST00000344824 SELENOOQ9BVL4 669 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms