RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CTNNAL1Q9UBT7 734 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 PLXNA3P51805 1871 aa14.02□□□□□ -0.16
CDC42-202ENST00000344548 KIAA0355O15063 1070 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 PAGE1O75459 146 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 NR2C2P49116 596 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 TPI1P60174 286 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 ELAVL2Q12926 359 aaKnown RBP14.02□□□□□ -0.17
CDC42-202ENST00000344548 PDIA2Q13087 525 aaKnown RBP14.02□□□□□ -0.17
CDC42-202ENST00000344548 PAFAH1B3Q15102 231 aaKnown RBP14.02□□□□□ -0.17
CDC42-202ENST00000344548 PSMD5Q16401 504 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 USP41Q3LFD5 358 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 TTC19Q6DKK2 380 aaPredicted RBP14.02□□□□□ -0.17
CDC42-202ENST00000344548 MFSD5Q6N075 450 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 NECAB2Q7Z6G3 386 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 MON1AQ86VX9 555 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 IGDCC3Q8IVU1 814 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 ETNK1Q9HBU6 452 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 NDFIP2Q9NV92 336 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 SHOC2Q9UQ13 582 aa14.02□□□□□ -0.17
CDC42-202ENST00000344548 CHD7Q9P2D1 2997 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 MOCS2O96007 188 aaPredicted RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 ZFXP17010 805 aaPredicted RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 YWHAQP27348 245 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 EPHB2P29323 1055 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 ATP1A2P50993 1020 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 IFI35P80217 286 aaPredicted RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 KCNJ11Q14654 390 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 C14orf80Q86SX3 495 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 RELL1Q8IUW5 271 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 ZBED8Q8IZ13 594 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 SLC39A11Q8N1S5 342 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 SPPL2BQ8TCT7 592 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 NOVA2Q9UNW9 492 aaKnown RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 KCNK1O00180 336 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 EN2P19622 333 aaPredicted RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 GRIA1P42261 906 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 IRAK1P51617 712 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 AIF1P55008 147 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 XRCC4Q13426 336 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 BTG3Q14201 252 aaPredicted RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 ARL13BQ3SXY8 428 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 HTR3CQ8WXA8 447 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 FBXO32Q969P5 355 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 P2RY11Q96G91 374 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 CELF6Q96J87 481 aaKnown RBP14.01□□□□□ -0.17
CDC42-202ENST00000344548 KLC2Q9H0B6 622 aa14.01□□□□□ -0.17
CDC42-202ENST00000344548 CLUHO75153 1309 aa14□□□□□ -0.17
CDC42-202ENST00000344548 KCNU1A8MYU2 1149 aa14□□□□□ -0.17
CDC42-202ENST00000344548 H7C4K7 107 aa14□□□□□ -0.17
CDC42-202ENST00000344548 ALOX15BO15296 676 aa14□□□□□ -0.17
CDC42-202ENST00000344548 DNAJB2P25686 324 aa14□□□□□ -0.17
CDC42-202ENST00000344548 RFC2P35250 354 aa14□□□□□ -0.17
CDC42-202ENST00000344548 GPX6P59796 221 aa14□□□□□ -0.17
CDC42-202ENST00000344548 GABPB1Q06547 395 aaPredicted RBP14□□□□□ -0.17
CDC42-202ENST00000344548 AP1B1Q10567 949 aa14□□□□□ -0.17
CDC42-202ENST00000344548 WASHC5Q12768 1159 aa14□□□□□ -0.17
CDC42-202ENST00000344548 EFEMP1Q12805 493 aa14□□□□□ -0.17
CDC42-202ENST00000344548 PRKD1Q15139 912 aaPredicted RBP14□□□□□ -0.17
CDC42-202ENST00000344548 HIF1AQ16665 826 aa14□□□□□ -0.17
CDC42-202ENST00000344548 CDKL3Q8IVW4 592 aaPredicted RBP14□□□□□ -0.17
CDC42-202ENST00000344548 FAM76AQ8TAV0 307 aa14□□□□□ -0.17
CDC42-202ENST00000344548 TFB1MQ8WVM0 346 aaKnown RBP14□□□□□ -0.17
CDC42-202ENST00000344548 SLC39A13Q96H72 371 aa14□□□□□ -0.17
CDC42-202ENST00000344548 FCRL2Q96LA5 508 aaPredicted RBP14□□□□□ -0.17
CDC42-202ENST00000344548 FBXO44Q9H4M3 255 aa14□□□□□ -0.17
CDC42-202ENST00000344548 CCSER2Q9H7U1 834 aa14□□□□□ -0.17
CDC42-202ENST00000344548 CXXC1Q9P0U4 656 aaPredicted RBP14□□□□□ -0.17
CDC42-202ENST00000344548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 LINC00271P0C7V0 271 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 HSPA1AP0DMV8 641 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 HSPA1BP0DMV9 641 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 HPDP32754 393 aaPredicted RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 EIF3BP55884 814 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 AUHQ13825 339 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 HEATR6Q6AI08 1181 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 KIAA1841Q6NSI8 718 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 MIB1Q86YT6 1006 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 CCNYQ8ND76 341 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 TRIM56Q9BRZ2 755 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDC42-202ENST00000344548 MPP6Q9NZW5 540 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 PAK5Q9P286 719 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 HS3ST4Q9Y661 456 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 SLC38A8A6NNN8 435 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 GCATO75600 419 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 SOD2P04179 222 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 APRTP07741 180 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 SSTR1P30872 391 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 CCR1P32246 355 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 HCAR3P49019 387 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 MAGOHP61326 146 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 ANKRD20A2Q5SQ80 823 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 ANKRD20A1Q5TYW2 823 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 PIK3R6Q5UE93 754 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 MANEALQ5VSG8 457 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 RWDD4Q6NW29 188 aaKnown RBP13.99□□□□□ -0.17
CDC42-202ENST00000344548 ARHGAP36Q6ZRI8 547 aa13.99□□□□□ -0.17
CDC42-202ENST00000344548 FAM43BQ6ZT52 329 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms