RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 SYNCRIPO60506 623 aaKnown RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 ERBB2P04626 1255 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 GABRG2P18507 467 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SLC6A4P31645 630 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 P2RY2P41231 377 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 POLR2FP61218 127 aaKnown RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SLC6A3Q01959 620 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 ZC3H12AQ5D1E8 599 aaKnown RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 PMS2CLQ68D20 193 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 OLFML1Q6UWY5 402 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 PRR23CQ6ZRP0 262 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SLC26A9Q7LBE3 791 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 MFN1Q8IWA4 741 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 DEFB106AQ8N104 65 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 AHI1Q8N157 1196 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 AOPEPQ8N6M6 819 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 ATP6V0D2Q8N8Y2 350 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 C12orf50Q8NA57 414 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 RNF34Q969K3 372 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 BTN2A3PQ96KV6 586 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 ABCB8Q9NUT2 735 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 DDIT4Q9NX09 232 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 GGA2Q9UJY4 613 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 CDV3Q9UKY7 258 aaKnown RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 RAD54BQ9Y620 910 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SYNJ2BP-COX16A0A087WUM0 186 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 ZNF217O75362 1048 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 DAB1O75553 588 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 GRAP2O75791 330 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 IGLV3-25P01717 112 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 PABPC1P11940 636 aaKnown RBP16.67■□□□□ 0.26
ATG4B-201ENST00000344376 ABCB4P21439 1286 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 HLA-FP30511 346 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 CDH5P33151 784 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-201ENST00000344376 MPLP40238 635 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 KLK7P49862 253 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 SGSHP51688 502 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 CREB5Q02930 508 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 UBXN1Q04323 297 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 MTA1Q13330 715 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 SYCP1Q15431 976 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 NADSYN1Q6IA69 706 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 CHST9Q7L1S5 443 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 LPCAT2Q7L5N7 544 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 CHSY1Q86X52 802 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 ERICH1Q86X53 443 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 ZNF677Q86XU0 584 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATG4B-201ENST00000344376 ZNF397Q8NF99 534 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-201ENST00000344376 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 RLN3Q8WXF3 142 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 RMDN1Q96DB5 314 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
ATG4B-201ENST00000344376 COX16Q9P0S2 106 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 CALCOCO1Q9P1Z2 691 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 STIM2Q9P246 746 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 PLA2G4CQ9UP65 541 aa16.67■□□□□ 0.26
ATG4B-201ENST00000344376 GFPT2O94808 682 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 ZNF18P17022 549 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 NDUFV2P19404 249 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 BCKDHBP21953 392 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 CCR1P32246 355 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 SOX5P35711 763 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 IL12RB1P42701 662 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 CDH18Q13634 790 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 ZNF234Q14588 700 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 PUM1Q14671 1186 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATG4B-201ENST00000344376 RSPO4Q2I0M5 234 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-201ENST00000344376 ANO6Q4KMQ2 910 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 MS4A13Q5J8X5 152 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 KIAA1211LQ6NV74 962 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 SERPINA13PQ6UXR4 307 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 NOP9Q86U38 636 aaKnown RBP16.66■□□□□ 0.26
ATG4B-201ENST00000344376 EPS8L1Q8TE68 723 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 C18orf8Q96DM3 657 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 PRICKLE1Q96MT3 831 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-201ENST00000344376 NLRC4Q9NPP4 1024 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 VPS45Q9NRW7 570 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 RRN3Q9NYV6 651 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 STAP1Q9ULZ2 295 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 SIK3Q9Y2K2 1263 aa16.66■□□□□ 0.26
ATG4B-201ENST00000344376 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.66■□□□□ 0.26
ATG4B-201ENST00000344376 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 WASH3PC4AMC7 463 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 F5H5T6 163 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 ATP5BP06576 529 aaKnown RBP16.65■□□□□ 0.26
ATG4B-201ENST00000344376 ZNF806P0C7X5 589 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 NOS2P35228 1153 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 SCNN1AP37088 669 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 STAT1P42224 750 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 DHPSP49366 369 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-201ENST00000344376 ENPP2Q13822 863 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 NCAPHQ15003 741 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 MAP7D1Q3KQU3 841 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 AASDHQ4L235 1098 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-201ENST00000344376 FNDC3BQ53EP0 1204 aaKnown RBP16.65■□□□□ 0.26
ATG4B-201ENST00000344376 RNF43Q68DV7 783 aa16.65■□□□□ 0.26
ATG4B-201ENST00000344376 KIAA1324Q6UXG2 1013 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms