RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 BORCS5Q969J3 196 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TRIM43Q96BQ3 446 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 C12orf43Q96C57 262 aaKnown RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ANKRD36BP1Q96IX9 119 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 EHD1Q9H4M9 534 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 MROH8Q9H579 483 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SACM1LQ9NTJ5 587 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SLC24A2Q9UI40 661 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 VPS51Q9UID3 782 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 POU2F3Q9UKI9 436 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SOX13Q9UN79 622 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 H3BNH8 94 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 KIAA0355O15063 1070 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 TIMM44O43615 452 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SNNO75324 88 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 GSRP00390 522 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 EIF2B2P49770 351 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PTK7Q13308 1070 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ORC2Q13416 577 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 COG2Q14746 738 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 LSM12Q3MHD2 195 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 TMEM102Q8N9M5 508 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 HCAR2Q8TDS4 363 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 C7orf26Q96N11 449 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 EBF4Q9BQW3 602 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 RPF2Q9H7B2 306 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PALMDQ9NP74 551 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 TYW1Q9NV66 732 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 GIN1Q9NXP7 522 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 FAF1Q9UNN5 650 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 B3GNT3Q9Y2A9 372 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 DTNAQ9Y4J8 743 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CROCCQ5TZA2 2017 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CFAP47Q6ZTR5 3102 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SMCO2A6NFE2 343 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SPATA31C2B4DYI2 1134 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 FAM189A1O60320 539 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 LRRN2O75325 713 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 JRKO75564 520 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PIAS1O75925 651 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SGPL1O95470 568 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CYP1A2P05177 515 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 FAM58BPP0C7Q3 252 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 BGNP21810 368 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 STAT1P42224 750 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SLC12A3P55017 1021 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 BMT2Q1RMZ1 405 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CBWD6Q4V339 395 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CBWD3Q5JTY5 395 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CBWD5Q5RIA9 395 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 BTBD8Q5XKL5 378 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ANKRD26P1Q6NSI1 321 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 USP17L6PQ6QN14 398 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 AGMOQ6ZNB7 445 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 MAVSQ7Z434 540 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 HPS6Q86YV9 775 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PQLC1Q8N2U9 271 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ATP6V0D2Q8N8Y2 350 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SLAIN1Q8ND83 568 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SREK1Q8WXA9 508 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 JADE3Q92613 823 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CALML4Q96GE6 196 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SERAC1Q96JX3 654 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CNBD2Q96M20 576 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PARK7Q99497 189 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CENPOQ9BU64 300 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 B3GNT4Q9C0J1 378 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 IKZF4Q9H2S9 585 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 RETREG1Q9H6L5 497 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 XPNPEP1Q9NQW7 623 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 RIC8BQ9NVN3 520 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 WRAP73Q9P2S5 460 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 NOCTQ9UK39 431 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CDC14AQ9UNH5 594 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 H3BMQ9 156 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 BMP10O95393 424 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SERPINA6P08185 405 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 MYCLP1P12525 358 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SMPD1P17405 629 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ITGB5P18084 799 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ITGAXP20702 1163 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 HOXA13P31271 388 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 NUP107P57740 925 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 LRP8Q14114 963 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 LRRC26Q2I0M4 334 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ARTNQ5T4W7 220 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CYP4A22Q5TCH4 519 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 LPCAT2Q7L5N7 544 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 NEK8Q86SG6 692 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PRPF39Q86UA1 669 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ITIH5Q86UX2 942 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SLC26A7Q8TE54 656 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 BHMTQ93088 406 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SLC10A4Q96EP9 437 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 TRIM11Q96F44 468 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 COG8Q96MW5 612 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 TSEN34Q9BSV6 310 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 CEP44Q9C0F1 390 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 UNC93B1Q9H1C4 597 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PKD2L1Q9P0L9 805 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms