RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 FAM35AQ86V20 835 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 UNC5BQ8IZJ1 945 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 KIF2BQ8N4N8 673 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 PPM1NQ8N819 430 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 GBP7Q8N8V2 638 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 SOCS4Q8WXH5 440 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 UTP4Q969X6 686 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ULBP1Q9BZM6 244 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 AGO3Q9H9G7 860 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 CD248Q9HCU0 757 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ALG13Q9NP73 1137 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 TIMM13Q9Y5L4 95 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
CDK5RAP1-201ENST00000339269 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 HACD1B0YJ81 288 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MGEA5O60502 916 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 LPXNO60711 386 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 KRT16P08779 473 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CYBAP13498 195 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DESP17661 470 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CLCNKBP51801 687 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TKTL1P51854 596 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DAOAP59103 153 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PAFAH1B3Q15102 231 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 LRRC6Q86X45 466 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TFB1MQ8WVM0 346 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ARNTL2Q8WYA1 636 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PCED1BQ96HM7 432 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 FAM111AQ96PZ2 611 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 KCNK16Q96T55 309 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SYT15Q9BQS2 421 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 RHOBTB2Q9BYZ6 727 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DDX43Q9NXZ2 648 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MOCS1Q9NZB8 636 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 USH1CQ9Y6N9 552 aa13.39□□□□□ -0.27
CDK5RAP1-201ENST00000339269 C9IYK1 514 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 M0QYT0 321 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 RNF103O00237 685 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GSTA2P09210 222 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CTSHP09668 335 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 FAM200BP0CF97 657 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GNAT1P11488 350 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 AKR1A1P14550 325 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SKIV2L2P42285 1042 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GLUD2P49448 558 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GJA9P57773 515 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 BMPR2Q13873 1038 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TTC39BQ5VTQ0 682 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CXCL17Q6UXB2 119 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ADAM32Q8TC27 787 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SH3TC2Q8TF17 1288 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ERP27Q96DN0 273 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 P2RY11Q96G91 374 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CEP41Q9BYV8 373 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 UPF3AQ9H1J1 476 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SLC17A6Q9P2U8 582 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SYNJ2BP-COX16A0A087WUM0 186 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ARL5CA6NH57 179 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ALDH1A2O94788 518 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 UNC5CO95185 931 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ELNP15502 786 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ARL4AP40617 200 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NIPAL4Q0D2K0 466 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SCAPQ12770 1279 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CTC1Q2NKJ3 1217 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ARTNQ5T4W7 220 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ICE2Q659A1 982 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 HEATR6Q6AI08 1181 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 RFX8Q6ZV50 586 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MRPL10Q7Z7H8 261 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SERINC5Q86VE9 423 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CTAGE3PQ8IX95 158 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NPWQ8N729 165 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PKMYT1Q99640 499 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MTG1Q9BT17 334 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PRDM12Q9H4Q4 367 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MANSC1Q9H8J5 431 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 KCNK13Q9HB14 408 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 LRRC4Q9HBW1 653 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 XAB2Q9HCS7 855 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
CDK5RAP1-201ENST00000339269 KIAA0100Q14667 2235 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 A8MUI8 341 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 H3BRJ5 948 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 C2CD2LO14523 706 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 AP1G2O75843 785 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PGK1P00558 417 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SNRPAP09012 282 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 C6orf222P0C671 652 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 BGNP21810 368 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PSMB4P28070 264 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GRK4P32298 578 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ADRA1BP35368 520 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms