RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ZC3H12AQ5D1E8 599 aaKnown RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 EFHC1Q5JVL4 640 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 PIK3R6Q5UE93 754 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 OTUD1Q5VV17 481 aaPredicted RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 SLC26A9Q7LBE3 791 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 RASSF3Q86WH2 238 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 ZNF513Q8N8E2 541 aaPredicted RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 ZNF397Q8NF99 534 aaPredicted RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 DDI1Q8WTU0 396 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 PRICKLE1Q96MT3 831 aaPredicted RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 NAP1L5Q96NT1 182 aaPredicted RBP15.86■□□□□ 0.13
PRKN-201ENST00000338468 ADAM33Q9BZ11 813 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 CBX8Q9HC52 389 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 CD248Q9HCU0 757 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 SEMA4GQ9NTN9 838 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 CALCOCO1Q9P1Z2 691 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 CEP83Q9Y592 693 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 CHD6Q8TD26 2715 aa15.86■□□□□ 0.13
PRKN-201ENST00000338468 AXIN1O15169 862 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 FOXD2O60548 495 aaPredicted RBP15.85■□□□□ 0.13
PRKN-201ENST00000338468 DAB1O75553 588 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 CYP1A1P04798 512 aaPredicted RBP15.85■□□□□ 0.13
PRKN-201ENST00000338468 STAT1P42224 750 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 SLC11A2P49281 568 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 DGKEP52429 567 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 CDR2Q01850 454 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 SIM2Q14190 667 aaPredicted RBP15.85■□□□□ 0.13
PRKN-201ENST00000338468 EOGTQ5NDL2 527 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 NAA35Q5VZE5 725 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 TMEM215Q68D42 235 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 PRR23CQ6ZRP0 262 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 ZNF677Q86XU0 584 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 XYLT1Q86Y38 959 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 TSTD1Q8NFU3 115 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 WFDC5Q8TCV5 224 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 IPO4Q8TEX9 1081 aaKnown RBP15.85■□□□□ 0.13
PRKN-201ENST00000338468 CPA5Q8WXQ8 436 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 TMA16Q96EY4 203 aaKnown RBP15.85■□□□□ 0.13
PRKN-201ENST00000338468 PCMTD1Q96MG8 357 aaPredicted RBP15.85■□□□□ 0.13
PRKN-201ENST00000338468 SPAG5Q96R06 1193 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 PCDHB18PQ96TA0 734 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 SLC2A11Q9BYW1 496 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 NUCKS1Q9H1E3 243 aaKnown RBP15.85■□□□□ 0.13
PRKN-201ENST00000338468 PDCL3Q9H2J4 239 aa15.85■□□□□ 0.13
PRKN-201ENST00000338468 A0A1B0GTH6 734 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 A0A1W2PQF6 199 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 KCNU1A8MYU2 1149 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 TFE3P19532 575 aaPredicted RBP15.84■□□□□ 0.13
PRKN-201ENST00000338468 KCNA4P22459 653 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 HLA-FP30511 346 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 WASP42768 502 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 ZNF445P59923 1031 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 CDK17Q00537 523 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 CSRP2Q16527 193 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 ZSCAN23Q3MJ62 389 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 ANO7Q6IWH7 933 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 NUDT18Q6ZVK8 323 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 LUZP1Q86V48 1076 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 ERICH1Q86X53 443 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 ZDHHC17Q8IUH5 632 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 MDGA1Q8NFP4 955 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 GAB3Q8WWW8 586 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 C18orf8Q96DM3 657 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 SYNCQ9H7C4 482 aa15.84■□□□□ 0.13
PRKN-201ENST00000338468 DCLK1O15075 740 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 RPP40O75818 363 aaKnown RBP15.83■□□□□ 0.12
PRKN-201ENST00000338468 MOCS2O96007 188 aaPredicted RBP15.83■□□□□ 0.12
PRKN-201ENST00000338468 PTMSP20962 102 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 NTSR1P30989 418 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 NOS2P35228 1153 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 SCNN1AP37088 669 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 SNX16P57768 344 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 RPS24P62847 133 aaKnown RBP15.83■□□□□ 0.12
PRKN-201ENST00000338468 MS4A13Q5J8X5 152 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 MPP7Q5T2T1 576 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 TRNP1Q6NT89 227 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 ANKS1BQ7Z6G8 1248 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 KIAA0907Q7Z7F0 614 aaPredicted RBP15.83■□□□□ 0.12
PRKN-201ENST00000338468 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.83■□□□□ 0.12
PRKN-201ENST00000338468 OLIG1Q8TAK6 271 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 BAP1Q92560 729 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 NT5C3BQ969T7 300 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 LMLNQ96KR4 655 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 NPY6RQ99463 290 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 PRMT1Q99873 361 aaKnown RBP15.83■□□□□ 0.12
PRKN-201ENST00000338468 GABRG3Q99928 467 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 IRX2Q9BZI1 471 aaPredicted RBP15.83■□□□□ 0.12
PRKN-201ENST00000338468 FAM204AQ9H8W3 233 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 DDIT4Q9NX09 232 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 CACNA2D2Q9NY47 1150 aa15.83■□□□□ 0.12
PRKN-201ENST00000338468 WASH3PC4AMC7 463 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 TBL1XO60907 577 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 UNGP13051 313 aaPredicted RBP15.82■□□□□ 0.12
PRKN-201ENST00000338468 MMP8P22894 467 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 MATKP42679 507 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 PTP4A2Q12974 167 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 ENPP2Q13822 863 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 KIAA1211LQ6NV74 962 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms