RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 VARS2Q5ST30 1063 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ANKS3Q6ZW76 656 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TMEM150AQ86TG1 271 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PLPP6Q8IY26 295 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CPXM2Q8N436 756 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ACTL9Q8TC94 416 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 URGCPQ8TCY9 931 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ZNF398Q8TD17 642 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ACMSDQ8TDX5 336 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC44A1Q8WWI5 657 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ELMO3Q96BJ8 720 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PLD4Q96BZ4 506 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 FCRL5Q96RD9 977 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 NAT9Q9BTE0 207 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 COLEC11Q9BWP8 271 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 MTRF1LQ9UGC7 380 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 GON4LQ3T8J9 2241 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 MTMR11A4FU01 709 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TMCO5BA8MYB1 307 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 HCRTO43612 131 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 GSRP00390 522 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SOD2P04179 222 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ITGB1P05556 798 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 CYP2F1P24903 491 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 CETN2P41208 172 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 UBE3AQ05086 875 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 NSUN2Q08J23 767 aaKnown RBP eCLIP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 MKRN3Q13064 507 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SND1Q7KZF4 910 aaKnown RBP eCLIP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TRABD2AQ86V40 505 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TMC8Q8IU68 726 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 RASGRP3Q8IV61 690 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 UNC45BQ8IWX7 931 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ARL8AQ96BM9 186 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ACE2Q9BYF1 805 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 GOLGA2P5Q9HBQ8 144 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 KRT82Q9NSB4 513 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ETNK2Q9NVF9 386 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 NXF1Q9UBU9 619 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 PPIL1Q9Y3C6 166 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 YJEFN3A6XGL0 299 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 E7ENQ6 273 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 CSDE1O75534 798 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 RNF8O76064 485 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 PENKP01210 267 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SUOXP51687 545 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SMAD3P84022 425 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 GPS2Q13227 327 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 RFTN1Q14699 578 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 MDH1BQ5I0G3 518 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 MPP7Q5T2T1 576 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 UBAP2Q5T6F2 1119 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SCARA5Q6ZMJ2 495 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 CCDC91Q7Z6B0 441 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC26A11Q86WA9 606 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 CDR2LQ86X02 465 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ZNF280BQ86YH2 543 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 GPR150Q8NGU9 434 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 RNF139Q8WU17 664 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 HERVK_113Q902F9 699 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TRIB3Q96RU7 358 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 KIFC1Q9BW19 673 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 FAM49AQ9H0Q0 323 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 STMN4Q9H169 189 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 XAB2Q9HCS7 855 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ZMYM5Q9UJ78 669 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 PCDHA11Q9Y5I1 949 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 OR51B4Q9Y5P0 310 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 PLXND1Q9Y4D7 1925 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 A0A087WUV0 522 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 H3BRJ5 948 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 MAFKO60675 156 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 GJB6O95452 261 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ATF2P15336 505 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 CD68P34810 354 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 MDH1P40925 334 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 MATR3P43243 847 aaKnown RBP eCLIP5.54□□□□□ -1.526e-6■■□□□ 12.4
PRPF4B-201ENST00000337659 SLC11A1P49279 550 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 NUMBP49757 651 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ROR1Q01973 937 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 C1QTNF12Q5T7M4 302 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TWF2Q6IBS0 349 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 DENND5AQ6IQ26 1287 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 KDELC1Q6UW63 502 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 DEFB106AQ8N104 65 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 DQX1Q8TE96 717 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 MTBPQ96DY7 904 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ZNF419Q96HQ0 510 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 STARD7Q9NQZ5 370 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 AFF4Q9UHB7 1163 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TBC1D30Q9Y2I9 924 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ASB3Q9Y575 518 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TRIM17Q9Y577 477 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ASMTLO95671 621 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 AP2A1O95782 977 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 F11P03951 625 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SHBGP04278 402 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 PRKCGP05129 697 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms