RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 ZSWIM1Q9BR11 485 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 NUP58Q9BVL2 599 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 CNTNAP3Q9BZ76 1288 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 FBRSQ9HAH7 460 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 CHMP5Q9NZZ3 219 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 SUN2Q9UH99 717 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 CLEC4EQ9ULY5 219 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 TLR6Q9Y2C9 796 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 NFE2L3Q9Y4A8 694 aa18.46■□□□□ 0.55
CMTM1-204ENST00000336328 ASCC3Q8N3C0 2202 aaKnown RBP18.45■□□□□ 0.54
CMTM1-204ENST00000336328 PCNX2A6NKB5 2137 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 MSI1O43347 362 aaKnown RBP18.45■□□□□ 0.54
CMTM1-204ENST00000336328 GABBR2O75899 941 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 LETM1O95202 739 aaPredicted RBP18.45■□□□□ 0.54
CMTM1-204ENST00000336328 IGLV3-27P01718 113 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 EPHX1P07099 455 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 POLR2EP19388 210 aaKnown RBP18.45■□□□□ 0.54
CMTM1-204ENST00000336328 SNX16P57768 344 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 CAMK4Q16566 473 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 PIK3R6Q5UE93 754 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 CHST9Q7L1S5 443 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.45■□□□□ 0.54
CMTM1-204ENST00000336328 FAM149B1Q96BN6 582 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 HSPA12BQ96MM6 686 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 WSB2Q9NYS7 404 aaPredicted RBP18.45■□□□□ 0.54
CMTM1-204ENST00000336328 USP36Q9P275 1121 aaKnown RBP18.45■□□□□ 0.54
CMTM1-204ENST00000336328 SLC12A6Q9UHW9 1150 aa18.45■□□□□ 0.54
CMTM1-204ENST00000336328 TNRC6BQ9UPQ9 1833 aaKnown RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 GTPBP10A4D1E9 387 aaKnown RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 THAP12O43422 761 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 PABPC1P11940 636 aaKnown RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 PMLP29590 882 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 HLA-FP30511 346 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 GNA15P30679 374 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 MAPK8P45983 427 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 SHC2P98077 582 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 EXOC3L4Q17RC7 722 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 FNDC3BQ53EP0 1204 aaKnown RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 SH3PXD2AQ5TCZ1 1133 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 TMEM110Q86TL2 294 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 SLC41A1Q8IVJ1 513 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 FAM114A1Q8IWE2 563 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 HJURPQ8NCD3 748 aaPredicted RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 OR2T3Q8NH03 318 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 ERLEC1Q96DZ1 483 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 TOE1Q96GM8 510 aaKnown RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 SLC4A5Q9BY07 1137 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 MKRN2Q9H000 416 aaKnown RBP18.44■□□□□ 0.54
CMTM1-204ENST00000336328 THAP9Q9H5L6 903 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 ABCB8Q9NUT2 735 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 GGA2Q9UJY4 613 aa18.44■□□□□ 0.54
CMTM1-204ENST00000336328 UPK3BL1B0FP48 263 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 UPK3BL2E5RIL1 263 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 ARHGAP33O14559 1287 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 OPHN1O60890 802 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 TBL1XO60907 577 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 DLDP09622 509 aaKnown RBP18.43■□□□□ 0.54
CMTM1-204ENST00000336328 RDXP35241 583 aaKnown RBP18.43■□□□□ 0.54
CMTM1-204ENST00000336328 TPMTP51580 245 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 ST8SIA6P61647 398 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 YWHAZP63104 245 aaKnown RBP18.43■□□□□ 0.54
CMTM1-204ENST00000336328 ZBTB16Q05516 673 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 SFSWAPQ12872 951 aaKnown RBP18.43■□□□□ 0.54
CMTM1-204ENST00000336328 MTA1Q13330 715 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 CAMK2GQ13555 558 aaPredicted RBP18.43■□□□□ 0.54
CMTM1-204ENST00000336328 HNRNPDQ14103 355 aaKnown RBP18.43■□□□□ 0.54
CMTM1-204ENST00000336328 TMEM215Q68D42 235 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 MBLAC2Q68D91 279 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 TRIM65Q6PJ69 517 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 FIBINQ8TAL6 211 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 DQX1Q8TE96 717 aaKnown RBP18.43■□□□□ 0.54
CMTM1-204ENST00000336328 NOX5Q96PH1 765 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 CRACR2AQ9BSW2 395 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 ZDHHC5Q9C0B5 715 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 PCED1AQ9H1Q7 454 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 SLC6A17Q9H1V8 727 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 POPDC2Q9HBU9 364 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 CAPN10Q9HC96 672 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 APEX2Q9UBZ4 518 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 DACH1Q9UI36 760 aa18.43■□□□□ 0.54
CMTM1-204ENST00000336328 MOCS3O95396 460 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 IGLV3-19P01714 112 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 APOEP02649 317 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 SLC2A3P11169 496 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 USP8P40818 1118 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 MTIF2P46199 727 aaKnown RBP18.42■□□□□ 0.54
CMTM1-204ENST00000336328 PTK2Q05397 1052 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 ARHGAP44Q17R89 818 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 PLEKHG6Q3KR16 790 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 DENND1BQ6P3S1 775 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 RFWD3Q6PCD5 774 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 ADIPOR2Q86V24 386 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 MFN1Q8IWA4 741 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 CLEC4CQ8WTT0 213 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 SORCS1Q8WY21 1168 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 DNASE2BQ8WZ79 361 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 GTPBP2Q9BX10 602 aaKnown RBP18.42■□□□□ 0.54
CMTM1-204ENST00000336328 GPR174Q9BXC1 333 aa18.42■□□□□ 0.54
CMTM1-204ENST00000336328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms