RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SLC25A41Q8N5S1 370 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 TMC2Q8TDI7 906 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 TP53INP1Q96A56 240 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 C7orf25Q9BPX7 421 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 PRRC2BQ5JSZ5 2229 aaKnown RBP6.32□□□□□ -1.4
CSMD1-201ENST00000335551 CYBBP04839 570 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 PCSK7Q16549 785 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 C11orf96Q7Z7L8 435 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 PYDC1Q8WXC3 89 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 ASB2Q96Q27 587 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 NDNQ99608 321 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 ANAPC2Q9UJX6 822 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 CEP170Q5SW79 1584 aa6.32□□□□□ -1.4
CSMD1-201ENST00000335551 SUPT7LO94864 414 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 NR3C2P08235 984 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SLC16A2P36021 539 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 PLET1Q6UQ28 207 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 OOSP2Q86WS3 158 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 PM20D2Q8IYS1 436 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ENGASEQ8NFI3 743 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 RNF145Q96MT1 663 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ZNF285Q96NJ3 590 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 IFNA7P01567 189 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 IREB2P48200 963 aaKnown RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 TOB2Q14106 344 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 EPC2Q52LR7 807 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ZRANB3Q5FWF4 1079 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 RPTNQ6XPR3 784 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 FUKQ8N0W3 1084 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 TEKT5Q96M29 485 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 FAM217BQ9NTX9 383 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 GPRC5DQ9NZD1 345 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ANKARQ7Z5J8 1434 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 MROH7-TTC4A0A0A0MT08 1334 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SERPINA1P01009 418 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 IST1P53990 364 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 TXNRD1Q16881 649 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 HS6ST3Q8IZP7 471 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 TMEM237Q96Q45 408 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 CINPQ9BW66 212 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ADAM33Q9BZ11 813 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 TRIM9Q9C026 710 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SP140LQ9H930 580 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ZNF180Q9UJW8 692 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 C3orf18Q9UK00 162 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 LSM7Q9UK45 103 aaKnown RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 PCDHB2Q9Y5E7 798 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 VCLP18206 1134 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 KPNA1P52294 538 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 NFIAQ12857 509 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 PDK2Q15119 407 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SNRNP35Q16560 246 aaKnown RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 USP17L2Q6R6M4 530 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ZNF438Q7Z4V0 828 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 STK32CQ86UX6 486 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 CPA5Q8WXQ8 436 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 KIF12Q96FN5 646 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 KLF6Q99612 283 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 YIPF2Q9BWQ6 316 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 MUC3BQ9H195 1237 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 LIMD1Q9UGP4 676 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ESPL1Q14674 2120 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SCGNO76038 276 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ALADP13716 330 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 NAA20P61599 178 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SCN1BQ07699 218 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 HIPK1Q86Z02 1210 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 MYO1HQ8N1T3 1032 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 EZH1Q92800 747 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 XKR8Q9H6D3 395 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 BARHL2Q9NY43 387 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 NDUFAF1Q9Y375 327 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 DYRK1BQ9Y463 629 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SNX8Q9Y5X2 465 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ABCB11O95342 1321 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ALDH1A1P00352 501 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 FGRP09769 529 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 PDGFRAP16234 1089 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 GRM4Q14833 912 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 STOX1Q6ZVD7 989 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 ZNF276Q8N554 614 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 SLC20A1Q8WUM9 679 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 GPRASP2Q96D09 838 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 RMDN3Q96TC7 470 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 MTG1Q9BT17 334 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 PLOD2O00469 737 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 EPN2O95208 641 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 PARNO95453 639 aaKnown RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 MZF1P28698 734 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
CSMD1-201ENST00000335551 GNA13Q14344 377 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 UBE2SQ16763 222 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 GATAD2AQ86YP4 633 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 NLGN1Q8N2Q7 840 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 FEM1BQ9UK73 627 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 MAGEB16A2A368 324 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 TCP10L2B9ZVM9 353 aa6.31□□□□□ -1.4
CSMD1-201ENST00000335551 RGS10O43665 173 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms