RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TBC1D7Q9P0N9 293 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GJE1A6NN92 205 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SCGB2A1O75556 95 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CALML3P27482 149 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 NAMPTP43490 491 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RPL5P46777 297 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 NEK3P51956 506 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 IL2P60568 153 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 TLR1Q15399 786 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEC23AQ15436 765 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CBWD6Q4V339 395 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 IQSEC1Q6DN90 963 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 C4orf19Q8IY42 314 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 LIN37Q96GY3 246 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 NEK6Q9HC98 313 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GULP1Q9UBP9 304 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 AP3M1Q9Y2T2 418 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 INSRP06213 1382 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 JCADQ9P266 1359 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 A0A0A6YYJ9 748 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ACOD1A6NK06 481 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLCO1B7G3V0H7 640 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 FBXO38Q6PIJ6 1188 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 LRIG3Q6UXM1 1119 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 EFL1Q7Z2Z2 1120 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF227Q86WZ6 799 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF671Q8TAW3 534 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RORBQ92753 470 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GCNAQ96QF7 691 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 TJP2Q9UDY2 1190 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC25A13Q9UJS0 675 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ATF5Q9Y2D1 282 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 E2F8A0AVK6 867 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 EFCAB10A6NFE3 127 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RFC3P40938 356 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 INTS11Q5TA45 600 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GPER1Q99527 375 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 FUT8Q9BYC5 575 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CRYL1Q9Y2S2 319 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 AGLP35573 1532 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZSCAN5CA6NGD5 496 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GMDSO60547 372 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RPS6KA5O75582 802 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 KDM4BO94953 1096 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 MYCLP1P12525 358 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GPTP24298 496 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GSSP48637 474 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 BMPR2Q13873 1038 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 PLEKHG4Q58EX7 1191 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 KYQ8NBH2 561 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZSCAN5AQ9BUG6 496 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 KANSL2Q9H9L4 492 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GPATCH2Q9NW75 528 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 UBQLN2Q9UHD9 624 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 MRPS23Q9Y3D9 190 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 NEDD4P46934 1319 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 HECW2Q9P2P5 1572 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SPTBP11277 2137 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 C4BPAP04003 597 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 PDGFRBP09619 1106 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 NCS1P62166 190 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 YWHAHQ04917 246 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 MARK2Q7KZI7 788 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 PTAR1Q7Z6K3 402 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 HID1Q8IV36 788 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR7A2PQ8NGA2 310 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 NDNQ99608 321 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CGREF1Q99674 301 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 HEXIM1O94992 359 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ALDH3B1P43353 468 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 STARD3Q14849 445 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 AGBL2Q5U5Z8 902 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 MTSS1LQ765P7 747 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SSX7Q7RTT5 188 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC13A5Q86YT5 568 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 HACE1Q8IYU2 909 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RHPN1Q8TCX5 695 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ADIPOR1Q96A54 375 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 DHRS1Q96LJ7 313 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SERPINB12Q96P63 405 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 TGS1Q96RS0 853 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 C1QTNF1Q9BXJ1 281 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RANBP3Q9H6Z4 567 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CD93Q9NPY3 652 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 EFCAB6Q5THR3 1501 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CABYRO75952 493 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ENO1P06733 434 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 RBP3P10745 1247 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 HLA-FP30511 346 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF132P52740 706 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 UBXN2AP68543 259 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CDKL1Q00532 357 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 RASA2Q15283 850 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 UAP1L1Q3KQV9 507 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PRMT9Q6P2P2 845 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 BHLHB9Q6PI77 547 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 GLG1Q92896 1179 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 HERPUD2Q9BSE4 406 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ADPRHL2Q9NX46 363 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms