RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TMC8Q8IU68 726 aa24.06■■□□□ 1.44
TSEN54-201ENST00000333213 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.06■■□□□ 1.44
TSEN54-201ENST00000333213 ARNTL2Q8WYA1 636 aa24.06■■□□□ 1.44
TSEN54-201ENST00000333213 OSBPL2Q9H1P3 480 aa24.06■■□□□ 1.44
TSEN54-201ENST00000333213 C10orf88Q9H8K7 445 aa24.06■■□□□ 1.44
TSEN54-201ENST00000333213 VPS18Q9P253 973 aa24.06■■□□□ 1.44
TSEN54-201ENST00000333213 NEU3Q9UQ49 428 aa24.06■■□□□ 1.44
TSEN54-201ENST00000333213 ANAPC1Q9H1A4 1944 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 MTCL1Q9Y4B5 1905 aaKnown RBP24.05■■□□□ 1.44
TSEN54-201ENST00000333213 SLC12A8A0AV02 714 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 APOL1O14791 398 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 RFPL2O75678 378 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 LRIG2O94898 1065 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 MAP3K6O95382 1288 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 MOCS2O96007 188 aaPredicted RBP24.05■■□□□ 1.44
TSEN54-201ENST00000333213 LRG1P02750 347 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 IVLP07476 585 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 MYBL2P10244 700 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 SLC10A2Q12908 348 aaPredicted RBP24.05■■□□□ 1.44
TSEN54-201ENST00000333213 BYSLQ13895 437 aaKnown RBP24.05■■□□□ 1.44
TSEN54-201ENST00000333213 TRIP4Q15650 581 aaPredicted RBP24.05■■□□□ 1.44
TSEN54-201ENST00000333213 HECTD3Q5T447 861 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 PPP2R2DQ66LE6 453 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 C1orf228Q6PIY5 440 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 RFX8Q6ZV50 586 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 GAREM2Q75VX8 874 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 ITIH5Q86UX2 942 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 SLCO2A1Q92959 643 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 HAPLN3Q96S86 360 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 SIK2Q9H0K1 926 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 EPB41L5Q9HCM4 733 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 GDF3Q9NR23 364 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 MAN1C1Q9NR34 630 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 ASB3Q9Y575 518 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 ATG2AQ2TAZ0 1938 aa24.05■■□□□ 1.44
TSEN54-201ENST00000333213 EEF2KO00418 725 aaKnown RBP24.04■■□□□ 1.44
TSEN54-201ENST00000333213 OAS1P00973 400 aaKnown RBP24.04■■□□□ 1.44
TSEN54-201ENST00000333213 HMBSP08397 361 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 ATP5C1P36542 298 aaKnown RBP24.04■■□□□ 1.44
TSEN54-201ENST00000333213 LMAN1P49257 510 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 GBE1Q04446 702 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 NKD2Q969F2 451 aaPredicted RBP24.04■■□□□ 1.44
TSEN54-201ENST00000333213 NEU2Q9Y3R4 380 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 HS3ST4Q9Y661 456 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 XIRP2A4UGR9 3374 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 H3BRJ5 948 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 CCL16O15467 120 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 NOMO1Q15155 1222 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 KLHDC10Q6PID8 442 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 B4GALNT4Q76KP1 1039 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 RBM23Q86U06 439 aaKnown RBP24.04■■□□□ 1.44
TSEN54-201ENST00000333213 TTC13Q8NBP0 860 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 ATL2Q8NHH9 583 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 UXTQ9UBK9 157 aaPredicted RBP24.04■■□□□ 1.44
TSEN54-201ENST00000333213 DNMT3LQ9UJW3 386 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 HEY1Q9Y5J3 304 aa24.04■■□□□ 1.44
TSEN54-201ENST00000333213 LPXNO60711 386 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 KCNQ1P51787 676 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 VCPP55072 806 aaKnown RBP24.03■■□□□ 1.44
TSEN54-201ENST00000333213 PIK3R6Q5UE93 754 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 LEKR1Q6ZMV7 388 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 PRUNE1Q86TP1 453 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 DDX42Q86XP3 938 aaKnown RBP eCLIP24.03■■□□□ 1.44
TSEN54-201ENST00000333213 GLIS1Q8NBF1 620 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 NETO2Q8NC67 525 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 GDPD5Q8WTR4 605 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 CASKIN2Q8WXE0 1202 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 P3H4Q92791 437 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 SLC22A12Q96S37 553 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 MSRAQ9UJ68 235 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 OBSL1O75147 1896 aa24.03■■□□□ 1.44
TSEN54-201ENST00000333213 DCLK1O15075 740 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 TGM2P21980 687 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 BMP8BP34820 402 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 PPP3CCP48454 512 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 HCAR3P49019 387 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 TUBP50607 506 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 RAB30Q15771 203 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 MANEALQ5VSG8 457 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 PDE12Q6L8Q7 609 aaKnown RBP24.02■■□□□ 1.44
TSEN54-201ENST00000333213 C14orf80Q86SX3 495 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 GSPT2Q8IYD1 628 aaKnown RBP24.02■■□□□ 1.44
TSEN54-201ENST00000333213 LRRN4Q8WUT4 740 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 SEC14L1Q92503 715 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 CDK5RAP1Q96SZ6 601 aaKnown RBP24.02■■□□□ 1.44
TSEN54-201ENST00000333213 TMEM121Q9BTD3 319 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 HCFC1R1Q9NWW0 138 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 HCFC2Q9Y5Z7 792 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 DOCK6Q96HP0 2047 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 FAM187AA6NFU0 413 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 ECEL1O95672 775 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 ERCC2P18074 760 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 GABRR2P28476 465 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 CARSP49589 748 aaKnown RBP24.02■■□□□ 1.44
TSEN54-201ENST00000333213 MLLT6P55198 1093 aaPredicted RBP24.02■■□□□ 1.44
TSEN54-201ENST00000333213 TPI1P60174 286 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 RING1Q06587 406 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 PPM1LQ5SGD2 360 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 CCDC33Q8N5R6 958 aa24.02■■□□□ 1.44
TSEN54-201ENST00000333213 CCDC114Q96M63 670 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms