RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CSDE1O75534 798 aaKnown RBP24.29■■□□□ 1.48
TSKU-201ENST00000333090 UBA1P22314 1058 aaKnown RBP24.29■■□□□ 1.48
TSKU-201ENST00000333090 ITGA9Q13797 1035 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 KBTBD6Q86V97 674 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 MICALL2Q8IY33 904 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 TEX13BQ9BXU2 312 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 INO80BQ9C086 356 aaPredicted RBP24.29■■□□□ 1.48
TSKU-201ENST00000333090 RNPEPQ9H4A4 650 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 RPF1Q9H9Y2 349 aaKnown RBP24.29■■□□□ 1.48
TSKU-201ENST00000333090 DCDC2Q9UHG0 476 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 E9PBE3 544 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 KLHL41O60662 606 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 MYL4P12829 197 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 CYP2F1P24903 491 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 GRK2P25098 689 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 R3HDM1Q15032 1099 aaKnown RBP24.29■■□□□ 1.48
TSKU-201ENST00000333090 TBC1D25Q3MII6 688 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 BSPRYQ5W0U4 402 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 MAP1SQ66K74 1059 aaPredicted RBP24.29■■□□□ 1.48
TSKU-201ENST00000333090 TMC7Q7Z402 723 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 CDKL2Q92772 493 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 MPP4Q96JB8 637 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 FAM96AQ9H5X1 160 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 TMEM216Q9P0N5 145 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 ATXN10Q9UBB4 475 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 ARHGAP26Q9UNA1 814 aa24.29■■□□□ 1.48
TSKU-201ENST00000333090 MYO18AQ92614 2054 aaKnown RBP24.29■■□□□ 1.48
TSKU-201ENST00000333090 ZNF195O14628 629 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 GJB1P08034 283 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 RALBP11234 206 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 VDRP11473 427 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 COX4I1P13073 169 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 FDFT1P37268 417 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 ALDH1A3P47895 512 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 ABCE1P61221 599 aaKnown RBP24.28■■□□□ 1.48
TSKU-201ENST00000333090 SLC10A2Q12908 348 aaPredicted RBP24.28■■□□□ 1.48
TSKU-201ENST00000333090 USP4Q13107 963 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 TLR1Q15399 786 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 NLRP4Q96MN2 994 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 BTBD9Q96Q07 612 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 COPG2Q9UBF2 871 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 TSPAN16Q9UKR8 245 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 FER1L6Q2WGJ9 1857 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 COL11A1P12107 1806 aaPredicted RBP24.28■■□□□ 1.48
TSKU-201ENST00000333090 CASQ2O14958 399 aaPredicted RBP24.28■■□□□ 1.48
TSKU-201ENST00000333090 GCATO75600 419 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 CYP3A5P20815 502 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 MTTPP55157 894 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 SESN2P58004 480 aaPredicted RBP24.28■■□□□ 1.48
TSKU-201ENST00000333090 KCNT2Q6UVM3 1135 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 PIP4K2CQ8TBX8 421 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 ZNF358Q9NW07 568 aa24.28■■□□□ 1.48
TSKU-201ENST00000333090 ADCY6O43306 1168 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 ZBTB14O43829 449 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 ITGA2BP08514 1039 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 SDC4P31431 198 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 SH3BGRP55822 239 aaPredicted RBP24.27■■□□□ 1.48
TSKU-201ENST00000333090 DEUP1Q05D60 604 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 IER5Q5VY09 327 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 OXCT2Q9BYC2 517 aaPredicted RBP24.27■■□□□ 1.48
TSKU-201ENST00000333090 GCOM2Q9BZD3 368 aaPredicted RBP24.27■■□□□ 1.48
TSKU-201ENST00000333090 AFG3L2Q9Y4W6 797 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 PRKCGP05129 697 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 STILQ15468 1287 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 C4orf22Q6V702 233 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 KCNK16Q96T55 309 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 ZNF670Q9BS34 389 aa24.27■■□□□ 1.48
TSKU-201ENST00000333090 FARP2O94887 1054 aaPredicted RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 SMIM18P0DKX4 95 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 TYK2P29597 1187 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 TCF7P36402 384 aaPredicted RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 GMPSP49915 693 aaPredicted RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 OAZ1P54368 228 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 NIPAL4Q0D2K0 466 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 PABPC1LQ4VXU2 614 aaKnown RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 HEATR6Q6AI08 1181 aaKnown RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 TSHZ1Q6ZSZ6 1077 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 C12orf29Q8N999 325 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 AGR3Q8TD06 166 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 MAGEB5Q9BZ81 275 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 PSME4Q14997 1843 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 CCDC160A6NGH7 325 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 PEX1O43933 1283 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 PROZP22891 400 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 PMLP29590 882 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 ICAM3P32942 547 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 OGFRL1Q5TC84 451 aaPredicted RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 TNS4Q8IZW8 715 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 DCUN1D1Q96GG9 259 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 WRNIP1Q96S55 665 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 COG4Q9H9E3 785 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 PTPRHQ9HD43 1115 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 ALDH1A2O94788 518 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 ALOX15P16050 662 aaPredicted RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 NDST1P52848 882 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 SNAPC2Q13487 334 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 SEMA5AQ13591 1074 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 MXD4Q14582 209 aaPredicted RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 FAM160B1Q5W0V3 765 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 JADE1Q6IE81 842 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms