RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PADI3Q9ULW8 664 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 WDR91A4D1P6 747 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 FAM155AB1AL88 458 aaPredicted RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 C9IYK1 514 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 F5H423 210 aaPredicted RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 SEPT4O43236 478 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 KRT37O76014 449 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 STK10O94804 968 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 RPLP2P05387 115 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 ALADP13716 330 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 PCSK1P29120 753 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 CD52P31358 61 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 GLUD2P49448 558 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 NEK3P51956 506 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 AIF1P55008 147 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 SARNPP82979 210 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 BNIP1Q12981 228 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 CTU1Q7Z7A3 348 aaKnown RBP17.94■□□□□ 0.46
DDX28-201ENST00000332395 COLGALT1Q8NBJ5 622 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 NTAN1Q96AB6 310 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 SMARCD1Q96GM5 515 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 VPS11Q9H270 941 aa17.94■□□□□ 0.46
DDX28-201ENST00000332395 TRIM49D1C9J1S8 452 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 HHLA1C9JL84 531 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 I3L4J1 428 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 MGEA5O60502 916 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 OPHN1O60890 802 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 ADAMTS4O75173 837 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 SNRPAP09012 282 aaKnown RBP17.93■□□□□ 0.46
DDX28-201ENST00000332395 NCAM1P13591 858 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 FLT3LGP49771 235 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 CDK16Q00536 496 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 TRIM32Q13049 653 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 FERMT1Q9BQL6 677 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 PRDM12Q9H4Q4 367 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 PCDHA11Q9Y5I1 949 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 FAM72CH0Y354 149 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 HGSO14964 777 aaPredicted RBP17.93■□□□□ 0.46
DDX28-201ENST00000332395 PPP1R12AO14974 1030 aaPredicted RBP17.93■□□□□ 0.46
DDX28-201ENST00000332395 DCLK1O15075 740 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 ZNF623O75123 536 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 LTFP02788 710 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 ASGR1P07306 291 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 ODC1P11926 461 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 IBSPP21815 317 aaPredicted RBP17.93■□□□□ 0.46
DDX28-201ENST00000332395 NCALDP61601 193 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 NKX3-2P78367 333 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 SCAPQ12770 1279 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 FAM72AQ5TYM5 149 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 FAM72DQ6L9T8 149 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 TRMT10BQ6PF06 316 aaKnown RBP17.93■□□□□ 0.46
DDX28-201ENST00000332395 OTOAQ7RTW8 1153 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 FAM72BQ86X60 149 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 CCNYQ8ND76 341 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 MYLPFQ96A32 169 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 RTP3Q9BQQ7 232 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 CEP41Q9BYV8 373 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 RHOBTB2Q9BYZ6 727 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 ECT2Q9H8V3 914 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 ANLNQ9NQW6 1124 aa17.93■□□□□ 0.46
DDX28-201ENST00000332395 FAM159BA6NKW6 160 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 I6L893 689 aaPredicted RBP17.92■□□□□ 0.46
DDX28-201ENST00000332395 CA12O43570 354 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 UGT1A9O60656 530 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 POMCP01189 267 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 MYCNP04198 464 aaPredicted RBP17.92■□□□□ 0.46
DDX28-201ENST00000332395 DHRS4L1P0CG22 281 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 CSH1P0DML2 217 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 CSH2P0DML3 217 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 MLNP12872 115 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 ETV4P43268 484 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 RAB27AP51159 221 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 CCDC15Q0P6D6 951 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 SEMA3BQ13214 749 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 PAN2Q504Q3 1202 aaKnown RBP17.92■□□□□ 0.46
DDX28-201ENST00000332395 LGSNQ5TDP6 509 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 PDCD7Q8N8D1 485 aaKnown RBP17.92■□□□□ 0.46
DDX28-201ENST00000332395 ANKLE1Q8NAG6 615 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 N4BP2L2Q92802 583 aaPredicted RBP17.92■□□□□ 0.46
DDX28-201ENST00000332395 PGAP3Q96FM1 320 aaPredicted RBP17.92■□□□□ 0.46
DDX28-201ENST00000332395 FAM111AQ96PZ2 611 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 UGT1A7Q9HAW7 530 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 UGT1A10Q9HAW8 530 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 UGT1A8Q9HAW9 530 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 XPNPEP3Q9NQH7 507 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 EIF2B3Q9NR50 452 aaKnown RBP17.92■□□□□ 0.46
DDX28-201ENST00000332395 DDIT4Q9NX09 232 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 SEPT10Q9P0V9 454 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 USH1CQ9Y6N9 552 aa17.92■□□□□ 0.46
DDX28-201ENST00000332395 B3GAT3O94766 335 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 AMHP03971 560 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 WASHC5Q12768 1159 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 BHLHA9Q7RTU4 235 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 TP53INP2Q8IXH6 220 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 MANSC1Q9H8J5 431 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 CSNK1G1Q9HCP0 422 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 FBXW11Q9UKB1 542 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 MYO18AQ92614 2054 aaKnown RBP17.91■□□□□ 0.46
DDX28-201ENST00000332395 ERCC2P18074 760 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 LRRC8BQ6P9F7 803 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms