RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 GRID1Q9ULK0 1009 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 VWA8A3KMH1 1905 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 GREB1Q4ZG55 1949 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 CCT8L1PA6NM43 557 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 FOXN2P32314 431 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 LHX8Q68G74 356 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 SLC26A11Q86WA9 606 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 CCDC110Q8TBZ0 833 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 NDRG1Q92597 394 aaKnown RBP14.09□□□□□ -0.15
SRPRA-201ENST00000332118 FATE1Q969F0 183 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 MTBPQ96DY7 904 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 TSGA13Q96PP4 275 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 ADAM2Q99965 735 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 COLEC11Q9BWP8 271 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 FNIP2Q9P278 1114 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 TBK1Q9UHD2 729 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 CHMP2BQ9UQN3 213 aa14.09□□□□□ -0.15
SRPRA-201ENST00000332118 IQANK1A0A1B0GTG1 560 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 CASTOR2A6NHX0 329 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 FOXO6A8MYZ6 492 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 MTSS1O43312 755 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 APOEP02649 317 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 SLC20A2Q08357 652 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 SPARCL1Q14515 664 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 MBTPS1Q14703 1052 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 BBS9Q3SYG4 887 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 STXBP5Q5T5C0 1151 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 KCTD11Q693B1 232 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 COLGALT2Q8IYK4 626 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 CRIPAKQ8N1N5 446 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 HAPLN3Q96S86 360 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 VPS11Q9H270 941 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 TMLHEQ9NVH6 421 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 SAMD15Q9P1V8 674 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 CACNG4Q9UBN1 327 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 MFHAS1Q9Y4C4 1052 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
SRPRA-201ENST00000332118 TCP11X1B4DZS4 312 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 DNAJC8O75937 253 aaPredicted RBP14.08□□□□□ -0.16
SRPRA-201ENST00000332118 CNTFP26441 200 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 MSH2P43246 934 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 BRMS1LQ5PSV4 323 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 AFMIDQ63HM1 303 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 SLC24A5Q71RS6 500 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 GSDMBQ8TAX9 411 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 TTC17Q96AE7 1141 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 P2RY11Q96G91 374 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 VAT1Q99536 393 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 NAT9Q9BTE0 207 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 PHF24Q9UPV7 400 aa14.08□□□□□ -0.16
SRPRA-201ENST00000332118 A0A1W2PPM1 405 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 FAM92AA1XBS5 289 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 ERI2A8K979 691 aaKnown RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 EEF2KO00418 725 aaKnown RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 KLF11O14901 512 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 AMHP03971 560 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 RPA3P35244 121 aaPredicted RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 MRPL58Q14197 206 aaKnown RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 DBN1Q16643 649 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 KBTBD12Q3ZCT8 623 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 NUGGCQ68CJ6 796 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 UNC5AQ6ZN44 842 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 PDZD4Q76G19 769 aaPredicted RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 OXNAD1Q96HP4 312 aaPredicted RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 FUBP3Q96I24 572 aaKnown RBP eCLIP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 TGS1Q96RS0 853 aaKnown RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 FTHL17Q9BXU8 183 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 SMOC2Q9H3U7 446 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 POC1B-GALNT4F8VUJ3 575 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 KIAA0754O94854 1291 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 HOXD10P28358 340 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 DNAJC3Q13217 504 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 ARL13BQ3SXY8 428 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 TTC39BQ5VTQ0 682 aaPredicted RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 MARK2Q7KZI7 788 aaKnown RBP14.07□□□□□ -0.16
SRPRA-201ENST00000332118 ZNF398Q8TD17 642 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 FAM149B1Q96BN6 582 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 APOPT1Q96IL0 206 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 HAUS2Q9NVX0 235 aa14.07□□□□□ -0.16
SRPRA-201ENST00000332118 WASH4PA8MWX3 477 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 FAM72CH0Y354 149 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 SARNPP82979 210 aaKnown RBP14.06□□□□□ -0.16
SRPRA-201ENST00000332118 CLLU1OSQ5K130 101 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 FAM72AQ5TYM5 149 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 FAM72DQ6L9T8 149 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 MSANTD2Q6P1R3 559 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 FAM72BQ86X60 149 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 OTUD6BQ8N6M0 293 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 ISL2Q96A47 359 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 KANSL3Q9P2N6 904 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 ABT1Q9ULW3 272 aaKnown RBP14.06□□□□□ -0.16
SRPRA-201ENST00000332118 GOLGA6L7A0A1B0GV03 622 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
SRPRA-201ENST00000332118 MAGEA11P43364 429 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms