RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 RGS20O76081 388 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 P4HBP07237 508 aaKnown RBP18.66■□□□□ 0.58
PKP3-201ENST00000331563 TSHRP16473 764 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 GTF2BQ00403 316 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 CNTN2Q02246 1040 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 CAMK2BQ13554 666 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 FASTKD1Q53R41 847 aaKnown RBP18.66■□□□□ 0.58
PKP3-201ENST00000331563 DEPDC1Q5TB30 811 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 TCEAL9Q9UHQ7 104 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 AFG3L2Q9Y4W6 797 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 A0A0B4J269 797 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 UGT1A9O60656 530 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 YBX3P16989 372 aaKnown RBP eCLIP18.66■□□□□ 0.582e-9■■□□□ 13.1
PKP3-201ENST00000331563 NELFEP18615 380 aaKnown RBP18.66■□□□□ 0.58
PKP3-201ENST00000331563 CDK18Q07002 472 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 VWA5B1Q5TIE3 1220 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 TRIM72Q6ZMU5 477 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 CATSPER1Q8NEC5 780 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 PPP4R1Q8TF05 950 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 UGT1A7Q9HAW7 530 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 UGT1A10Q9HAW8 530 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 UGT1A8Q9HAW9 530 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 CSDE1O75534 798 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 STAMBPO95630 424 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 THRAP10827 490 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 PSMC3P17980 439 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 RARRES1P49788 294 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 RPL10AP62906 217 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 APOFQ13790 326 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 TMEM214Q6NUQ4 689 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 C16orf46Q6P387 395 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 CATSPERGQ6ZRH7 1159 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 TFB1MQ8WVM0 346 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 VCPIP1Q96JH7 1222 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 NLRP4Q96MN2 994 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 ANLNQ9NQW6 1124 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 DDX56Q9NY93 547 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 DOCK5Q9H7D0 1870 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 TMEM191CA6NGB0 347 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 AIM2O14862 343 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 SPAG6O75602 509 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 RFPL1O75677 317 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 TMEM191BP0C7N4 346 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 TNNI1P19237 187 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 YWHABP31946 246 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 QARSP47897 775 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 SLC1A6P48664 564 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 EIF3EP60228 445 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 PDAP1Q13442 181 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 DPYSL3Q14195 570 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 FLOT2Q14254 428 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 ITPRIPL1Q6GPH6 555 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 DHRS4L2Q6PKH6 230 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 SAMD3Q8N6K7 520 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 FAF2Q96CS3 445 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 NEURL2Q9BR09 285 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 FAM213AQ9BRX8 229 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 NUF2Q9BZD4 464 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 CAAP1Q9H8G2 361 aa18.65■□□□□ 0.58
PKP3-201ENST00000331563 ZC3H7BQ9UGR2 993 aaKnown RBP18.65■□□□□ 0.58
PKP3-201ENST00000331563 MAPTP10636 758 aaKnown RBP18.64■□□□□ 0.58
PKP3-201ENST00000331563 KCNA4P22459 653 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 BCAP31P51572 246 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 CDKL1Q00532 357 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.58
PKP3-201ENST00000331563 TUBB3Q13509 450 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 RBBP6Q7Z6E9 1792 aaKnown RBP18.64■□□□□ 0.58
PKP3-201ENST00000331563 PHF13Q86YI8 300 aaPredicted RBP18.64■□□□□ 0.58
PKP3-201ENST00000331563 PHTF2Q8N3S3 785 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 OTUD5Q96G74 571 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 DCUN1D5Q9BTE7 237 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 ELP3Q9H9T3 547 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 GIT1Q9Y2X7 761 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 TEX264Q9Y6I9 313 aa18.64■□□□□ 0.58
PKP3-201ENST00000331563 NOP56O00567 594 aaKnown RBP18.64■□□□□ 0.57
PKP3-201ENST00000331563 CYP24A1Q07973 514 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 ZNF252P-AS1Q0IIN9 211 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 EEPD1Q7L9B9 569 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 RFX6Q8HWS3 928 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 NLRP7Q8WX94 980 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 BIRC8Q96P09 236 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 SYT17Q9BSW7 474 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 OSBPL6Q9BZF3 934 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 PNPOQ9NVS9 261 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 CLEC11AQ9Y240 323 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 GOLGA8TH3BQL2 631 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 CDK9P50750 372 aaKnown RBP18.64■□□□□ 0.57
PKP3-201ENST00000331563 ADGRE1Q14246 886 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 LRRC38Q5VT99 294 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 TMC2Q8TDI7 906 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 SREK1Q8WXA9 508 aaKnown RBP18.64■□□□□ 0.57
PKP3-201ENST00000331563 GBA3Q9H227 469 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 TBX20Q9UMR3 447 aa18.64■□□□□ 0.57
PKP3-201ENST00000331563 MCF2LO15068 1137 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 CFLARO15519 480 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 COX4I1P13073 169 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 PHKA2P46019 1235 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 IDH3AP50213 366 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 NUDT2P50583 147 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms