RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C12orf76Q8N812 135 aaPredicted RBP16.39■□□□□ 0.21
PDGFB-201ENST00000331163 CCDC63Q8NA47 563 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 ZMIZ2Q8NF64 920 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 DQX1Q8TE96 717 aaKnown RBP16.39■□□□□ 0.21
PDGFB-201ENST00000331163 EXOC2Q96KP1 924 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 FAM167BQ9BTA0 163 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 NEUROG2Q9H2A3 272 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 TMBIM4Q9HC24 238 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 LRRC4CQ9HCJ2 640 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 H7C4K7 107 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 RFPL2O75678 378 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 RASSF9O75901 435 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 WDR5P61964 334 aaKnown RBP16.39■□□□□ 0.21
PDGFB-201ENST00000331163 CYP4F8P98187 520 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 PTP4A2Q12974 167 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 RSPO2Q6UXX9 243 aaPredicted RBP16.39■□□□□ 0.21
PDGFB-201ENST00000331163 DCLK3Q9C098 648 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 CHMP2BQ9UQN3 213 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 ENO4A6NNW6 628 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 RFXAPO00287 272 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 GABRR2P28476 465 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 CDK7P50613 346 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 TBX4P57082 545 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 ZNF844Q08AG5 666 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 TXNDC8Q6A555 127 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 CES3Q6UWW8 571 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 ZNF598Q86UK7 904 aaKnown RBP16.39■□□□□ 0.21
PDGFB-201ENST00000331163 BCL7CQ8WUZ0 217 aaPredicted RBP16.39■□□□□ 0.21
PDGFB-201ENST00000331163 LRRC45Q96CN5 670 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 GDF3Q9NR23 364 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 TRPM5Q9NZQ8 1165 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 FGF18O76093 207 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 TIMP1P01033 207 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 MRPL10Q7Z7H8 261 aaKnown RBP16.38■□□□□ 0.21
PDGFB-201ENST00000331163 KCNV2Q8TDN2 545 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 NSMCE1Q8WV22 266 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 CASP10Q92851 521 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 SPDL1Q96EA4 605 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 IGSF21Q96ID5 467 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 UROC1Q96N76 676 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 AVILO75366 819 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 KCNQ1P51787 676 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 IRX4P78413 519 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 ZDHHC14Q8IZN3 488 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 ELMOD1Q8N336 334 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 KIF2BQ8N4N8 673 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 APBB2Q92870 758 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 FCRL2Q96LA5 508 aaPredicted RBP16.38■□□□□ 0.21
PDGFB-201ENST00000331163 GCNAQ96QF7 691 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 TTC24A2A3L6 582 aaPredicted RBP16.38■□□□□ 0.21
PDGFB-201ENST00000331163 FAM72CH0Y354 149 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 PRLRP16471 622 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 TPH1P17752 444 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 ERCC2P18074 760 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 GDF10P55107 478 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 MAXP61244 160 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 FAM72AQ5TYM5 149 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 FAM72DQ6L9T8 149 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 FAM72BQ86X60 149 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 SLC25A41Q8N5S1 370 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 MCRS1Q96EZ8 462 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 C17orf80Q9BSJ5 609 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 ACTR5Q9H9F9 607 aaPredicted RBP16.38■□□□□ 0.21
PDGFB-201ENST00000331163 NOD2Q9HC29 1040 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 PCDH18Q9HCL0 1135 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 FAM114A2Q9NRY5 505 aa16.38■□□□□ 0.21
PDGFB-201ENST00000331163 FOXO6A8MYZ6 492 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 GOLGA8RI6L899 631 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 CA3P07451 260 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 CCR1P32246 355 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 LRRC14Q15048 493 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 GLE1Q53GS7 698 aaKnown RBP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 FAM109BQ6ICB4 259 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 TMEM110Q86TL2 294 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 RBM15Q96T37 977 aaKnown RBP eCLIP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 KLF6Q99612 283 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 SLC4A5Q9BY07 1137 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 SEMA4AQ9H3S1 761 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 HDCP19113 662 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 RPL10AP62906 217 aaKnown RBP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 LONRF1Q17RB8 773 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 TRIM68Q6AZZ1 485 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 ARFGAP1Q8N6T3 406 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 ARL14EPQ8N8R7 260 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 PYROXD1Q8WU10 500 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 CRISPLD1Q9H336 500 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 VRTNQ9H8Y1 702 aa16.37■□□□□ 0.21
PDGFB-201ENST00000331163 TLR8Q9NR97 1041 aaKnown RBP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 TSR3Q9UJK0 312 aaKnown RBP16.37■□□□□ 0.21
PDGFB-201ENST00000331163 hCG_1818297A0A087WSY0 165 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 A0A1W2PRU2 124 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 WDR27A2RRH5 827 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 GABBR2O75899 941 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 ARHGAP17Q68EM7 881 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 MFSD5Q6N075 450 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 CCDC197Q8NCU1 140 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 DDX23Q9BUQ8 820 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms