RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 OSBPP22059 807 aa25■■□□□ 1.59
SOX1-201ENST00000330949 ZBED5Q49AG3 693 aa25■■□□□ 1.59
SOX1-201ENST00000330949 GPD1LQ8N335 351 aa25■■□□□ 1.59
SOX1-201ENST00000330949 AGAP3Q96P47 875 aa25■■□□□ 1.59
SOX1-201ENST00000330949 CLK4Q9HAZ1 481 aaKnown RBP25■■□□□ 1.59
SOX1-201ENST00000330949 SLC8A2Q9UPR5 921 aa25■■□□□ 1.59
SOX1-201ENST00000330949 GPC6Q9Y625 555 aaPredicted RBP25■■□□□ 1.59
SOX1-201ENST00000330949 FUCA1P04066 466 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 CNTFP26441 200 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 TRPC3Q13507 836 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 TAZQ16635 292 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 SMTNL2Q2TAL5 461 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 ATP2A3Q93084 1043 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 LENG8Q96PV6 779 aaPredicted RBP24.99■■□□□ 1.59
SOX1-201ENST00000330949 SIPA1L1O43166 1804 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 PSMD12O00232 456 aaPredicted RBP24.99■■□□□ 1.59
SOX1-201ENST00000330949 GLRA3O75311 464 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 STAMBPO95630 424 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 HLA-DRAP01903 254 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 KDELR1P24390 212 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 DCLRE1AQ6PJP8 1040 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 CHPT1Q8WUD6 406 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 GMCL1Q96IK5 515 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 GLIS2Q9BZE0 524 aaPredicted RBP24.99■■□□□ 1.59
SOX1-201ENST00000330949 CCDC68Q9H2F9 335 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 QTRT2Q9H974 415 aaKnown RBP24.99■■□□□ 1.59
SOX1-201ENST00000330949 PALMDQ9NP74 551 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 OLAHQ9NV23 265 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 SCN9AQ15858 1988 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 K7EPI3 171 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 ZBTB11O95625 1053 aaPredicted RBP24.99■■□□□ 1.59
SOX1-201ENST00000330949 ROR1Q01973 937 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 NRF1Q16656 503 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 HADHQ16836 314 aaKnown RBP24.99■■□□□ 1.59
SOX1-201ENST00000330949 N4BP2L1Q5TBK1 243 aaPredicted RBP24.99■■□□□ 1.59
SOX1-201ENST00000330949 C16orf87Q6PH81 154 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 RFX6Q8HWS3 928 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 DSELQ8IZU8 1212 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 TMEM161BQ8NDZ6 487 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 SPATA18Q8TC71 538 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 TMEM79Q9BSE2 394 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 GPRC5CQ9NQ84 441 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 TBC1D22BQ9NU19 505 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 SERPINA10Q9UK55 444 aa24.99■■□□□ 1.59
SOX1-201ENST00000330949 ESRRBO95718 433 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 CCDC130P13994 396 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 NRLP54845 237 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 MGAT5BQ3V5L5 792 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 SLC27A3Q5K4L6 730 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 ACMSDQ8TDX5 336 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 LRRC39Q96DD0 335 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 TRPC7Q9HCX4 862 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 C7orf72A4D263 438 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 NOP56O00567 594 aaKnown RBP24.98■■□□□ 1.59
SOX1-201ENST00000330949 EPHA3P29320 983 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 NLRP11P59045 1033 aaKnown RBP24.98■■□□□ 1.59
SOX1-201ENST00000330949 SEPT6Q14141 434 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 SPOPLQ6IQ16 392 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 DARS2Q6PI48 645 aaKnown RBP24.98■■□□□ 1.59
SOX1-201ENST00000330949 TRIM50Q86XT4 487 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 GMCL1P1Q8NEA9 526 aa24.98■■□□□ 1.59
SOX1-201ENST00000330949 TRNAU1APQ9NX07 287 aaKnown RBP24.98■■□□□ 1.59
SOX1-201ENST00000330949 KLHL41O60662 606 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 BCAS2O75934 225 aaPredicted RBP24.97■■□□□ 1.59
SOX1-201ENST00000330949 ABCE1P61221 599 aaKnown RBP24.97■■□□□ 1.59
SOX1-201ENST00000330949 SLC25A11Q02978 314 aaKnown RBP24.97■■□□□ 1.59
SOX1-201ENST00000330949 PCLAFQ15004 111 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 ZACNQ401N2 412 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 ZNF516Q92618 1163 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 IDI2Q9BXS1 227 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 RAB6BQ9NRW1 208 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 EMCNQ9ULC0 261 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 FAM159BA6NKW6 160 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 PLIN3O60664 434 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 EIF2AK2P19525 551 aaKnown RBP24.97■■□□□ 1.59
SOX1-201ENST00000330949 ME2P23368 584 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 HARS2P49590 506 aaKnown RBP24.97■■□□□ 1.59
SOX1-201ENST00000330949 KCNT1Q5JUK3 1230 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 CPXCR1Q8N123 301 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 GRIN3AQ8TCU5 1115 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 ZNF606Q8WXB4 792 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 KCNN1Q92952 543 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 HEPHQ9BQS7 1158 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 PLAC1Q9HBJ0 212 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 CDY2AQ9Y6F7 541 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 CDY1Q9Y6F8 540 aa24.97■■□□□ 1.59
SOX1-201ENST00000330949 A0A087WXM4 84 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 GOLGA8TH3BQL2 631 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 ITGA7Q13683 1181 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 ZNF362Q5T0B9 420 aaPredicted RBP24.96■■□□□ 1.59
SOX1-201ENST00000330949 CNTN6Q9UQ52 1028 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 LRRC37AA6NMS7 1700 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 RGSL1A5PLK6 1076 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 MS4A2Q01362 244 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 DCAF6Q58WW2 860 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 STRIP1Q5VSL9 837 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 DNAJC14Q6Y2X3 702 aaPredicted RBP24.96■■□□□ 1.59
SOX1-201ENST00000330949 MASTLQ96GX5 879 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 COG4Q9H9E3 785 aa24.96■■□□□ 1.59
SOX1-201ENST00000330949 ANLNQ9NQW6 1124 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms