RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CKMP06732 381 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 GOT1P17174 413 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 HCAR3P49019 387 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 KCNQ1P51787 676 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 ADAM15Q13444 863 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 LLGL1Q15334 1064 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 FAM72AQ5TYM5 149 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 PIK3R6Q5UE93 754 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC9A4Q6AI14 798 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 FAM72DQ6L9T8 149 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 FAM72BQ86X60 149 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 MAB21L3Q8N8X9 362 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 LRRN4CLQ8ND94 238 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 PCDH19Q8TAB3 1148 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 C1orf74Q96LT6 269 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 AP1M1Q9BXS5 423 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 TASP1Q9H6P5 420 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 RBM12Q9NTZ6 932 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 SNX10Q9Y5X0 201 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 CPQQ9Y646 472 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 HS3ST4Q9Y661 456 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 NUP210Q8TEM1 1887 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 CCDC188H7C350 402 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 HOXB8P17481 243 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 CEBPBP17676 345 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 HOXC13P31276 330 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 HARS2P49590 506 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 TPI1P60174 286 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ADCY2Q08462 1091 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 DPYSQ14117 519 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 MS4A13Q5J8X5 152 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 MANEALQ5VSG8 457 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 RFX8Q6ZV50 586 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ADAT2Q7Z6V5 191 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ZDHHC14Q8IZN3 488 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 PQLC3Q8N755 202 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 AZIN2Q96A70 460 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 CYP2S1Q96SQ9 504 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 MAK16Q9BXY0 300 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC46A2Q9BY10 475 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ARHGEF4Q9NR80 690 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 GKN1Q9NS71 199 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 SMPD4Q9NXE4 827 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 XPO7Q9UIA9 1087 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ARHGAP26Q9UNA1 814 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 NEU3Q9UQ49 428 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 MRPS23Q9Y3D9 190 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 APOL1O14791 398 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 CREB3O43889 395 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 CST8O60676 142 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 LATS1O95835 1130 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 IRF1P10914 325 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ZFXP17010 805 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 CORO1AP31146 461 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC11A2P49281 568 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 MLLT6P55198 1093 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ADGRE1Q14246 886 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 CYP1B1Q16678 543 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 SYCE2Q6PIF2 218 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 PRELID2Q8N945 189 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 C12orf50Q8NA57 414 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ADAMTS19Q8TE59 1207 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 SIK2Q9H0K1 926 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 NR2E1Q9Y466 385 aa10.59□□□□□ -0.71
VIPAS39-201ENST00000327028 ACSL4O60488 711 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 PHF2O75151 1096 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 LRIG2O94898 1065 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 TGM2P21980 687 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 GGCXP38435 758 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 DYNLT1P63172 113 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 COL19A1Q14993 1142 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 ARTNQ5T4W7 220 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 CMTM8Q8IZV2 173 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 TTC13Q8NBP0 860 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 TBC1D31Q96DN5 1066 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 PRMT1Q99873 361 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 FRMD8P1Q9BZ68 369 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 DCLK3Q9C098 648 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 R3HDM2Q9Y2K5 976 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 E9PAM4 449 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 APOC4-APOC2K7ER74 178 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 FGF10O15520 208 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 APOC2P02655 101 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 AMPD1P23109 780 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 AVPR1AP37288 418 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 CTC1Q2NKJ3 1217 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 NADSYN1Q6IA69 706 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 Q6ZNB5 142 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 CHSY1Q86X52 802 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 DDX42Q86XP3 938 aaKnown RBP eCLIP10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 ZNF683Q8IZ20 524 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 MMGT1Q8N4V1 131 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 PLD5Q8N7P1 536 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 ITFG1Q8TB96 612 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 WBP2Q969T9 261 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms