RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 PAK5Q9P286 719 aa12.64□□□□□ -0.39
CACNA1F-201ENST00000323022 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
CACNA1F-201ENST00000323022 PTCH2Q9Y6C5 1203 aa12.64□□□□□ -0.39
CACNA1F-201ENST00000323022 KIF1CO43896 1103 aaKnown RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 OR6A2O95222 327 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 KCNA5P22460 613 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 NRIP1P48552 1158 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 USP4Q13107 963 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 CRTC3Q6UUV7 619 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 RASSF10A6NK89 507 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 PCCBP05166 539 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 TYMPP19971 482 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 EIF4BP23588 611 aaKnown RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 SPRP35270 261 aaPredicted RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 CCDC142Q17RM4 750 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 C2orf27AQ580R0 203 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 CISHQ9NSE2 258 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 RIC8BQ9NVN3 520 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 ZNF839A8K0R7 811 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 HNF4AP41235 474 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 SKIV2L2P42285 1042 aaKnown RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 TBC1D25Q3MII6 688 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 UNKQ9C0B0 810 aaKnown RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 IARS2Q9NSE4 1012 aaKnown RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 KIAA1257Q9ULG3 409 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 KIF20BQ96Q89 1820 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 SERPINB4P48594 390 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 PHF19Q5T6S3 580 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 ADCK1Q86TW2 530 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 TRIM69Q86WT6 500 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 C4orf19Q8IY42 314 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 EMC1Q8N766 993 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 CRYL1Q9Y2S2 319 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 H3BM21 787 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 LGR5O75473 907 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 RANBP1P43487 201 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 AGMOQ6ZNB7 445 aa12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.63□□□□□ -0.39
CACNA1F-201ENST00000323022 H0YC42 278 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 MAGOHP61326 146 aaKnown RBP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 CACHD1Q5VU97 1274 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 EIF3LQ9Y262 564 aaKnown RBP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 KRT16P08779 473 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 BRCC3P46736 316 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 SUZ12Q15022 739 aaKnown RBP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 ADGRA1Q86SQ6 560 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 SUN3Q8TAQ9 357 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 ACOX2Q99424 681 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 BARX2Q9UMQ3 279 aaPredicted RBP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 TBC1D4O60343 1298 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 RBP3P10745 1247 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 GDI1P31150 447 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 LSP1P33241 339 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 PLA2G4AP47712 749 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 FUT11Q495W5 492 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 GDF6Q6KF10 455 aaPredicted RBP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 PLD3Q8IV08 490 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 CYP2W1Q8TAV3 490 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 ELMO1Q92556 727 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 VPS4BO75351 444 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 MYBL2P10244 700 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 UCHL3P15374 230 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 TIE1P35590 1138 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 BOLA3Q53S33 107 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 TKTL2Q9H0I9 626 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 DNAJC11Q9NVH1 559 aa12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 GEMIN8Q9NWZ8 242 aaKnown RBP12.62□□□□□ -0.39
CACNA1F-201ENST00000323022 BTNL9Q6UXG8 535 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 RNF44Q7L0R7 432 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 SCUBE3Q8IX30 993 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 ZNF296Q8WUU4 475 aaPredicted RBP12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 METTL21AQ8WXB1 218 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 ARMC7Q9H6L4 198 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 USE1Q9NZ43 259 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 SH3BP4Q9P0V3 963 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 ABI3Q9P2A4 366 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 OR10H1Q9Y4A9 318 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 HNRNPRO43390 633 aaKnown RBP12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 MAGEC1O60732 1142 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 PDHA1P08559 390 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 TMEM86AQ8N2M4 240 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 WWP1Q9H0M0 922 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 TMEM245Q9H330 911 aa12.61□□□□□ -0.39
CACNA1F-201ENST00000323022 ACTR8Q9H981 624 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms