RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SLC13A1Q9BZW2 595 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 RAD54BQ9Y620 910 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 M0QYT0 321 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 GABRDO14764 452 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 MYL3P08590 195 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 PGAM1P18669 254 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 TMPRSS15P98073 1019 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 DEUP1Q05D60 604 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 AP1B1Q10567 949 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 MROH9Q5TGP6 573 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 PDZD4Q76G19 769 aaPredicted RBP23.03■■□□□ 1.28
PNKP-201ENST00000322344 NUDCD3Q8IVD9 361 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 ARRDC4Q8NCT1 418 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 PTPN18Q99952 460 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 PCMTD2Q9NV79 361 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 Q9Y3F1 56 aa23.03■■□□□ 1.28
PNKP-201ENST00000322344 WDR27A2RRH5 827 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 HMX2A2RU54 273 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 SERPINB3P29508 390 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 TWF2Q6IBS0 349 aaKnown RBP23.02■■□□□ 1.28
PNKP-201ENST00000322344 KYAT3Q6YP21 454 aaKnown RBP23.02■■□□□ 1.28
PNKP-201ENST00000322344 CLEC20AQ6ZU45 233 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 PAQR9Q6ZVX9 377 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 NDRG1Q92597 394 aaKnown RBP23.02■■□□□ 1.28
PNKP-201ENST00000322344 PTCD3Q96EY7 689 aaKnown RBP23.02■■□□□ 1.28
PNKP-201ENST00000322344 PPP1R10Q96QC0 940 aaKnown RBP23.02■■□□□ 1.28
PNKP-201ENST00000322344 MED10Q9BTT4 135 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 AP5M1Q9H0R1 490 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 IGSF9Q9P2J2 1179 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 NUMBLQ9Y6R0 609 aa23.02■■□□□ 1.28
PNKP-201ENST00000322344 EEF2KO00418 725 aaKnown RBP23.01■■□□□ 1.27
PNKP-201ENST00000322344 CLDN5O00501 218 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 FAM200BP0CF97 657 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 MYL2P10916 166 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 CALB2P22676 271 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 EPHB2P29323 1055 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 NIPAL4Q0D2K0 466 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 BST1Q10588 318 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 DPYSQ14117 519 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 CASC4Q6P4E1 433 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 TLDC1Q6P9B6 456 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.01■■□□□ 1.27
PNKP-201ENST00000322344 PDCD7Q8N8D1 485 aaKnown RBP23.01■■□□□ 1.27
PNKP-201ENST00000322344 NTAN1Q96AB6 310 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 TRIM56Q9BRZ2 755 aaKnown RBP23.01■■□□□ 1.27
PNKP-201ENST00000322344 SLC38A7Q9NVC3 462 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 UTRNP46939 3433 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 PTGESO14684 152 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 ATP5BP06576 529 aaKnown RBP23.01■■□□□ 1.27
PNKP-201ENST00000322344 BPGMP07738 259 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 OCRLQ01968 901 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 CHI3L2Q15782 390 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 ACCSLQ4AC99 568 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 WSCD1Q658N2 575 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 RFX8Q6ZV50 586 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 STKLD1Q8NE28 680 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 BTBD10Q9BSF8 475 aa23.01■■□□□ 1.27
PNKP-201ENST00000322344 CREB3O43889 395 aa23■■□□□ 1.27
PNKP-201ENST00000322344 BEST1O76090 585 aa23■■□□□ 1.27
PNKP-201ENST00000322344 ACAT1P24752 427 aaKnown RBP23■■□□□ 1.27
PNKP-201ENST00000322344 TKTL1P51854 596 aa23■■□□□ 1.27
PNKP-201ENST00000322344 CCNG1P51959 295 aa23■■□□□ 1.27
PNKP-201ENST00000322344 PITX1P78337 314 aaPredicted RBP23■■□□□ 1.27
PNKP-201ENST00000322344 IFRD2Q12894 506 aaPredicted RBP23■■□□□ 1.27
PNKP-201ENST00000322344 TEX44Q53QW1 395 aa23■■□□□ 1.27
PNKP-201ENST00000322344 MDH1BQ5I0G3 518 aa23■■□□□ 1.27
PNKP-201ENST00000322344 TMEM86AQ8N2M4 240 aa23■■□□□ 1.27
PNKP-201ENST00000322344 CCNYQ8ND76 341 aa23■■□□□ 1.27
PNKP-201ENST00000322344 RSRC1Q96IZ7 334 aaKnown RBP23■■□□□ 1.27
PNKP-201ENST00000322344 RNPEPL1Q9HAU8 725 aa23■■□□□ 1.27
PNKP-201ENST00000322344 ARL8BQ9NVJ2 186 aa23■■□□□ 1.27
PNKP-201ENST00000322344 C9IYK1 514 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 E7ENQ6 273 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 DCLK1O15075 740 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 HOXC8P31273 242 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 GJA9P57773 515 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 WASHC5Q12768 1159 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 SCAPQ12770 1279 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 CRLF3Q8IUI8 442 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 ANKRD27Q96NW4 1050 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 MECRQ9BV79 373 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 PRDM12Q9H4Q4 367 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.99■■□□□ 1.27
PNKP-201ENST00000322344 NR2E3Q9Y5X4 410 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 SYNJ2BP-COX16A0A087WUM0 186 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 MGAT1P26572 445 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 LHX1P48742 406 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 HCAR3P49019 387 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 NDUFV1P49821 464 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 NME3Q13232 169 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 SYPL2Q5VXT5 272 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 PACS1Q6VY07 963 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 C2orf69Q8N8R5 385 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 NSMCE1Q8WV22 266 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 LENG1Q96BZ8 264 aaPredicted RBP22.99■■□□□ 1.27
PNKP-201ENST00000322344 WWP1Q9H0M0 922 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 KRT82Q9NSB4 513 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 PIGVQ9NUD9 493 aa22.99■■□□□ 1.27
PNKP-201ENST00000322344 DDX43Q9NXZ2 648 aaKnown RBP22.99■■□□□ 1.27
PNKP-201ENST00000322344 COX16Q9P0S2 106 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms