RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 KCNU1A8MYU2 1149 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 F5H5T6 163 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 SERPING1P05155 500 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 SP9P0CG40 484 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 PDGFRAP16234 1089 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 TACR2P21452 398 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 HOXD9P28356 352 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-201ENST00000320936 SDC4P31431 198 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 TNFRSF4P43489 277 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 SGSHP51688 502 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 PTP4A2Q12974 167 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 PIK3R6Q5UE93 754 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 OTUD1Q5VV17 481 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-201ENST00000320936 CCDC33Q8N5R6 958 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 C3orf20Q8ND61 904 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 USP33Q8TEY7 942 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 P2RY11Q96G91 374 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 ZDHHC4Q9NPG8 344 aa19.39■□□□□ 0.69
CIRBP-201ENST00000320936 ARIH1Q9Y4X5 557 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-201ENST00000320936 KLF8O95600 359 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-201ENST00000320936 F9P00740 461 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 RDXP35241 583 aaKnown RBP19.38■□□□□ 0.69
CIRBP-201ENST00000320936 TSR1Q2NL82 804 aaKnown RBP19.38■□□□□ 0.69
CIRBP-201ENST00000320936 MS4A13Q5J8X5 152 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 TRNP1Q6NT89 227 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 DCUN1D2Q6PH85 259 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 ANKS1BQ7Z6G8 1248 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 MCOLN2Q8IZK6 566 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 MAML2Q8IZL2 1156 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-201ENST00000320936 CFAP52Q8N1V2 620 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 ALLCQ8N6M5 410 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 JOSD2Q8TAC2 188 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 RXFP2Q8WXD0 754 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 PRICKLE1Q96MT3 831 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-201ENST00000320936 MCEEQ96PE7 176 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 WDCPQ9H6R7 721 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 C2orf42Q9NWW7 574 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 CALCOCO1Q9P1Z2 691 aa19.38■□□□□ 0.69
CIRBP-201ENST00000320936 CHURC1-FNTBB4DL54 471 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 DDX3XO00571 662 aaKnown RBP eCLIP19.37■□□□□ 0.691e-13■■■□□ 16.1
CIRBP-201ENST00000320936 ATMINO43313 823 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 FTLP02792 175 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 PLEKP08567 350 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 RRM1P23921 792 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 GSCP56915 257 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 RPS24P62847 133 aaKnown RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 MRPS21P82921 87 aaKnown RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 NHLH1Q02575 133 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 MTA1Q13330 715 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 CDH18Q13634 790 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 BRMS1LQ5PSV4 323 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 EMC10Q5UCC4 262 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 HGSNATQ68CP4 663 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 HEATR6Q6AI08 1181 aaKnown RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 SARM1Q6SZW1 724 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 ARCQ7LC44 396 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 TMC6Q7Z403 805 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 MFN1Q8IWA4 741 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 CARNMT1Q8N4J0 409 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 ZNF513Q8N8E2 541 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 OLIG1Q8TAK6 271 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 SLC2A11Q9BYW1 496 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 ADAM33Q9BZ11 813 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 TKTL2Q9H0I9 626 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 SIK2Q9H0K1 926 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 POLR3BQ9NW08 1133 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 ZNHIT6Q9NWK9 470 aaKnown RBP19.37■□□□□ 0.69
CIRBP-201ENST00000320936 CLEC4EQ9ULY5 219 aa19.37■□□□□ 0.69
CIRBP-201ENST00000320936 ANTXRLA6NF34 631 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 C2CD4BA6NLJ0 364 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 RTN2O75298 545 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 PAGE1O75459 146 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 CISD3P0C7P0 127 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 DESP17661 470 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 GPD1P21695 349 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 RFC1P35251 1148 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 GGCXP38435 758 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 CXCR3P49682 368 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 ATXN1P54253 815 aaKnown RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 EIF4EBP2Q13542 120 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 DMC1Q14565 340 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 C15orf59Q2T9L4 293 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 RABGAP1LQ5R372 815 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 ZC3H14Q6PJT7 736 aaKnown RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 MAMSTRQ6ZN01 415 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 TRMT11Q7Z4G4 463 aaKnown RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 FAM131BQ86XD5 332 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 DNAAF5Q86Y56 855 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 TXNDC5Q8NBS9 432 aaKnown RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 NT5C3BQ969T7 300 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 ZNF653Q96CK0 615 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 PGAP3Q96FM1 320 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 HHIPQ96QV1 700 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 IRX2Q9BZI1 471 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-201ENST00000320936 CIPCQ9C0C6 399 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 ABCB8Q9NUT2 735 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 ADAMTS1Q9UHI8 967 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 SLC27A6Q9Y2P4 619 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 R4GN57 208 aa19.36■□□□□ 0.69
CIRBP-201ENST00000320936 A0A0A0MRY4 1105 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms