RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 VAV1P15498 845 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 EN2P19622 333 aaPredicted RBP17.53■□□□□ 0.4
SSR4-201ENST00000320857 CYP2C18P33260 490 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 SLC5A3P53794 718 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 YWHAGP61981 247 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSR4-201ENST00000320857 SARNPP82979 210 aaKnown RBP17.53■□□□□ 0.4
SSR4-201ENST00000320857 AP1B1Q10567 949 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 SEMA5AQ13591 1074 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 ANKRD20A2Q5SQ80 823 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 ANKRD20A1Q5TYW2 823 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 ANKRD20A3Q5VUR7 823 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 BTBD8Q5XKL5 378 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 TRABD2AQ86V40 505 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 CCDC33Q8N5R6 958 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 DYDC1Q8WWB3 177 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 RNF34Q969K3 372 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 FUBP3Q96I24 572 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSR4-201ENST00000320857 CYTH2Q99418 400 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 LGMNQ99538 433 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 FAM107BQ9H098 131 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 BRD8Q9H0E9 1235 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 TKTL2Q9H0I9 626 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 TMEM51Q9NW97 253 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 LRFN2Q9ULH4 789 aa17.53■□□□□ 0.4
SSR4-201ENST00000320857 FAM72CH0Y354 149 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 PQBP1O60828 265 aaKnown RBP17.52■□□□□ 0.4
SSR4-201ENST00000320857 GSTA2P09210 222 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 CREB1P16220 341 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 ERCC2P18074 760 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 KRT15P19012 456 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 MSH2P43246 934 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 CDK16Q00536 496 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 FAM72AQ5TYM5 149 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 FAM72DQ6L9T8 149 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 MICALCLQ6ZW33 695 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 FAM72BQ86X60 149 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 SCAMP5Q8TAC9 235 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 PRMT1Q99873 361 aaKnown RBP17.52■□□□□ 0.4
SSR4-201ENST00000320857 ZMYND15Q9H091 742 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 CRISPLD2Q9H0B8 497 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 XAB2Q9HCS7 855 aaKnown RBP17.52■□□□□ 0.4
SSR4-201ENST00000320857 DNAJB4Q9UDY4 337 aa17.52■□□□□ 0.4
SSR4-201ENST00000320857 COL4A4P53420 1690 aaPredicted RBP17.52■□□□□ 0.39
SSR4-201ENST00000320857 TNFRSF10BO14763 440 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 TRIM66O15016 1216 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 HOXA2O43364 376 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 IGLV3-25P01717 112 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 OR4Q2P0C623 313 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 STX2P32856 288 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 SERPINB6P35237 376 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 VARS2Q5ST30 1063 aaKnown RBP17.52■□□□□ 0.39
SSR4-201ENST00000320857 SYCP2LQ5T4T6 812 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 ANKRD33Q7Z3H0 272 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 CPLX4Q7Z7G2 160 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 CAND1Q86VP6 1230 aaKnown RBP17.52■□□□□ 0.39
SSR4-201ENST00000320857 IGDCC3Q8IVU1 814 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 SCN4BQ8IWT1 228 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 ANKRD42Q8N9B4 389 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 CCNYQ8ND76 341 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 P2RY11Q96G91 374 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 DHRS4Q9BTZ2 278 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 OSBPL2Q9H1P3 480 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 TRABDQ9H4I3 376 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 PRDM12Q9H4Q4 367 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 ANLNQ9NQW6 1124 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 ABI2Q9NYB9 513 aaPredicted RBP17.52■□□□□ 0.39
SSR4-201ENST00000320857 ADAM28Q9UKQ2 775 aa17.52■□□□□ 0.39
SSR4-201ENST00000320857 OR6C75A6NL08 312 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 RNF103O00237 685 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 MX2P20592 715 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 DRD4P21917 467 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 IFRD2Q12894 506 aaPredicted RBP17.51■□□□□ 0.39
SSR4-201ENST00000320857 MTM1Q13496 603 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 BRMS1LQ5PSV4 323 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 ADGRD1Q6QNK2 874 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 SLC39A5Q6ZMH5 540 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 DENND5BQ6ZUT9 1274 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 DIS3LQ8TF46 1054 aaKnown RBP17.51■□□□□ 0.39
SSR4-201ENST00000320857 C8orf48Q96LL4 319 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 CASD1Q96PB1 797 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 ZNF317Q96PQ6 595 aaPredicted RBP17.51■□□□□ 0.39
SSR4-201ENST00000320857 SMC6Q96SB8 1091 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 PAFAH2Q99487 392 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 EIF2B3Q9NR50 452 aaKnown RBP17.51■□□□□ 0.39
SSR4-201ENST00000320857 OR12D3Q9UGF7 316 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 GGA2Q9UJY4 613 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 SMG5Q9UPR3 1016 aaKnown RBP17.51■□□□□ 0.39
SSR4-201ENST00000320857 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
SSR4-201ENST00000320857 TANC1Q9C0D5 1861 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 FAM47DPA6NHR8 397 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 FOXO6A8MYZ6 492 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 I6L893 689 aaPredicted RBP17.5■□□□□ 0.39
SSR4-201ENST00000320857 IRAK2O43187 625 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 MTSS1O43312 755 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 AVILO75366 819 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 PARNO95453 639 aaKnown RBP17.5■□□□□ 0.39
SSR4-201ENST00000320857 CPP00450 1065 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 CXCL10P02778 98 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 ALDH2P05091 517 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms