RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 STAT4Q14765 748 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 PSMD5Q16401 504 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 KYNUQ16719 465 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 HTR3CQ8WXA8 447 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 CASP10Q92851 521 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SLC39A13Q96H72 371 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 C1orf74Q96LT6 269 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SERPINB12Q96P63 405 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 TMEM106CQ9BVX2 250 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 VN1R3Q9BXE9 311 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 STMN4Q9H169 189 aaPredicted RBP18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SAYSD1Q9NPB0 183 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 TLR8Q9NR97 1041 aaKnown RBP18.42■□□□□ 0.54
RAB39A-201ENST00000320578 TLR6Q9Y2C9 796 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 CDY1Q9Y6F8 540 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 CEP350Q5VT06 3117 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 ZDHHC11BP0C7U3 371 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 RAG1P15918 1043 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 MX2P20592 715 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 ARPP19P56211 112 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 WDR5P61964 334 aaKnown RBP18.41■□□□□ 0.54
RAB39A-201ENST00000320578 DSG1Q02413 1049 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 ZNF33AQ06730 810 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 MGAT5BQ3V5L5 792 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 TPGS2Q68CL5 300 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 KDM7AQ6ZMT4 941 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 MCUQ8NE86 351 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 ZBTB9Q96C00 473 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 TLCD1Q96CP7 247 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 PWWP2AQ96N64 755 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 CCDC77Q9BR77 488 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 PPCSQ9HAB8 311 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 OSER1Q9NX31 292 aa18.41■□□□□ 0.54
RAB39A-201ENST00000320578 AFF4Q9UHB7 1163 aaKnown RBP18.41■□□□□ 0.54
RAB39A-201ENST00000320578 ZMYND8Q9ULU4 1186 aaPredicted RBP18.41■□□□□ 0.54
RAB39A-201ENST00000320578 A0A0A0MRY4 1105 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 RASGRF2O14827 1237 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 MTSS1O43312 755 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 STK10O94804 968 aaKnown RBP18.4■□□□□ 0.54
RAB39A-201ENST00000320578 LRIG2O94898 1065 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 CSF2RAP15509 400 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 ITGB8P26012 769 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 PGFP49763 221 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 USP46P62068 366 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 BASP1P80723 227 aaKnown RBP18.4■□□□□ 0.54
RAB39A-201ENST00000320578 IFRD2Q12894 506 aaPredicted RBP18.4■□□□□ 0.54
RAB39A-201ENST00000320578 TNFAIP8L3Q5GJ75 292 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 MANEALQ5VSG8 457 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 SDHAF4Q5VUM1 108 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 ANKRD22Q5VYY1 191 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 PRSS55Q6UWB4 352 aaPredicted RBP18.4■□□□□ 0.54
RAB39A-201ENST00000320578 PDIK1LQ8N165 341 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 ARFGAP2Q8N6H7 521 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 TTC9BQ8N6N2 239 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 OVCA2Q8WZ82 227 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 FBXO32Q969P5 355 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 SPATA13Q96N96 652 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 CRISPLD1Q9H336 500 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.4■□□□□ 0.54
RAB39A-201ENST00000320578 GMIPQ9P107 970 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 XPO7Q9UIA9 1087 aaKnown RBP18.4■□□□□ 0.54
RAB39A-201ENST00000320578 MAFFQ9ULX9 164 aa18.4■□□□□ 0.54
RAB39A-201ENST00000320578 A0A087WUV0 522 aaPredicted RBP18.39■□□□□ 0.54
RAB39A-201ENST00000320578 WDR27A2RRH5 827 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 FGF10O15520 208 aaPredicted RBP18.39■□□□□ 0.54
RAB39A-201ENST00000320578 OPHN1O60890 802 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 TMEM63AO94886 807 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 ACSL3O95573 720 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 IVLP07476 585 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 TPSB2P20231 275 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 FDFT1P37268 417 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 DUSP4Q13115 394 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 TPSAB1Q15661 275 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 LZTR1Q8N653 840 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 TMEM169Q96HH4 297 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 CDK5RAP1Q96SZ6 601 aaKnown RBP18.39■□□□□ 0.54
RAB39A-201ENST00000320578 IL23AQ9NPF7 189 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 RAB6BQ9NRW1 208 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 FNIP2Q9P278 1114 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 SLC27A5Q9Y2P5 690 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 MFHAS1Q9Y4C4 1052 aa18.39■□□□□ 0.54
RAB39A-201ENST00000320578 ABLIM3O94929 683 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 AGTP01019 485 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 GYS2P54840 703 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 DEFB103AP81534 67 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 CDK16Q00536 496 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 KIAA1841Q6NSI8 718 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 DDX53Q86TM3 631 aaKnown RBP18.39■□□□□ 0.53
RAB39A-201ENST00000320578 VPS52Q8N1B4 723 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 HDAC11Q96DB2 347 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 SEPT5Q99719 369 aaPredicted RBP18.39■□□□□ 0.53
RAB39A-201ENST00000320578 UBE2OQ9C0C9 1292 aaKnown RBP18.39■□□□□ 0.53
RAB39A-201ENST00000320578 PRDM12Q9H4Q4 367 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 SPG21Q9NZD8 308 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 SFMBT1Q9UHJ3 866 aa18.39■□□□□ 0.53
RAB39A-201ENST00000320578 BRCA2P51587 3418 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 SLC38A8A6NNN8 435 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 E7EVH7 732 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 PAGE1O75459 146 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 VAV1P15498 845 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms