RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SH3BP1Q9Y3L3 701 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 HS3ST4Q9Y661 456 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 OLFM2O95897 454 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 TFF2Q03403 129 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 ADCY2Q08462 1091 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 FAM78AQ5JUQ0 283 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 NADSYN1Q6IA69 706 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 KLHDC10Q6PID8 442 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 CHSY1Q86X52 802 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 CFAP52Q8N1V2 620 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 MYADMQ96S97 322 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 PCDH18Q9HCL0 1135 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 ARHGEF38Q9NXL2 777 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 CD207Q9UJ71 328 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 AGO1Q9UL18 857 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 MFHAS1Q9Y4C4 1052 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 TCRBV7S2A1N4TA0A589 114 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 KIF2AO00139 706 aaPredicted RBP15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 KDELR1P24390 212 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 L1CAMP32004 1257 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 IRAK1P51617 712 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 DPYSL3Q14195 570 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 BOLA3Q53S33 107 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 MS4A13Q5J8X5 152 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 FAM182AQ5T1J6 154 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 POLNQ7Z5Q5 900 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 C14orf80Q86SX3 495 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 BBS7Q8IWZ6 715 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 KATNAL2Q8IYT4 538 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 LRRN4Q8WUT4 740 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 MPP6Q9NZW5 540 aa15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 SAE1Q9UBE0 346 aaPredicted RBP15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 HBS1LQ9Y450 684 aaKnown RBP15.94■□□□□ 0.14
PDLIM5-202ENST00000318007 IGLV3-27P01718 113 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 SLC6A4P31645 630 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 AMPD2Q01433 879 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 PPP2R5DQ14738 602 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 BRMS1LQ5PSV4 323 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 SEL1L2Q5TEA6 688 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 PAPD7Q5XG87 772 aaKnown RBP15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 NUGGCQ68CJ6 796 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 TPGS1Q6ZTW0 290 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 RSPRY1Q96DX4 576 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 ZFYVE19Q96K21 471 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 RIPOR3Q96MK2 946 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 CWC15Q9P013 229 aaKnown RBP15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 GRXCR2A6NFK2 248 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 C3orf70A6NLC5 250 aaPredicted RBP15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 EEF2KO00418 725 aaKnown RBP15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 DAPK3O43293 454 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 LRIG2O94898 1065 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 FGGP02679 453 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 POU2F2P09086 479 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 SGSHP51688 502 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 SLC7A9P82251 487 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 TRIM68Q6AZZ1 485 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 SPOCD1Q6ZMY3 1216 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 B4GALNT4Q76KP1 1039 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 TFAP2DQ7Z6R9 452 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 RFX6Q8HWS3 928 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 ATP6V0D2Q8N8Y2 350 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 PLD4Q96BZ4 506 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 BTN2A3PQ96KV6 586 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 LRRC3BQ96PB8 259 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 DDX56Q9NY93 547 aaKnown RBP15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 PLK2Q9NYY3 685 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 SLC12A6Q9UHW9 1150 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 WNT6Q9Y6F9 365 aa15.93■□□□□ 0.14
PDLIM5-202ENST00000318007 SLC2A3P11169 496 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 DDX6P26196 483 aaKnown RBP eCLIP15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 EPHB2P29323 1055 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 KPNA1P52294 538 aaPredicted RBP15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 TPI1P60174 286 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 DPYSL2Q16555 572 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 CCDC181Q5TID7 509 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 LRRC38Q5VT99 294 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 UNC45BQ8IWX7 931 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 LGI2Q8N0V4 545 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 EXD1Q8NHP7 514 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 HLA-CQ95604 372 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 NTAN1Q96AB6 310 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 ASB16Q96NS5 453 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 RPRD1AQ96P16 312 aaPredicted RBP15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 KXD1Q9BQD3 176 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 AP1M1Q9BXS5 423 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 ETNK2Q9NVF9 386 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 STIM2Q9P246 746 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 LSM7Q9UK45 103 aaKnown RBP15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 ARHGAP26Q9UNA1 814 aa15.92■□□□□ 0.14
PDLIM5-202ENST00000318007 E9PAM4 449 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 ACSL4O60488 711 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 AMPD1P23109 780 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 IL4RP24394 825 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 ARL4AP40617 200 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 CDKN2BP42772 138 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 SLC11A2P49281 568 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 RING1Q06587 406 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 NNTQ13423 1086 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 AUHQ13825 339 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 GRM2Q14416 872 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms