RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 POPDC2Q9HBU9 364 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 ITM2CQ9NQX7 267 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 ABCB8Q9NUT2 735 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 GGA2Q9UJY4 613 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 SLC6A14Q9UN76 642 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 NAALADL1Q9UQQ1 740 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 EML5Q05BV3 1969 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 TBL1XO60907 577 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 CFIP05156 583 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 FYNP06241 537 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 PABPC1P11940 636 aaKnown RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 PON1P27169 355 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 ERCC5P28715 1186 aaPredicted RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 CD6P30203 668 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 ANP32AP39687 249 aaKnown RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 ATXN3P54252 364 aaPredicted RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 YWHAZP63104 245 aaKnown RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 PTK2Q05397 1052 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 GFPT1Q06210 699 aaPredicted RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 MAN2A1Q16706 1144 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 PEAR1Q5VY43 1037 aaPredicted RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 TMEM215Q68D42 235 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 RFWD3Q6PCD5 774 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 GJB7Q6PEY0 223 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.45■□□□□ 0.54
TPM1-203ENST00000317516 SORCS1Q8WY21 1168 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 ZNF419Q96HQ0 510 aaPredicted RBP18.45■□□□□ 0.54
TPM1-203ENST00000317516 NOX5Q96PH1 765 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 SLC6A17Q9H1V8 727 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 SLC12A6Q9UHW9 1150 aa18.45■□□□□ 0.54
TPM1-203ENST00000317516 GOLGA6L7A0A1B0GV03 622 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 E5RJQ4 531 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 CDX4O14627 284 aaPredicted RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 PAPSS1O43252 624 aaPredicted RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 KCNK5O95279 499 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 APOEP02649 317 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 SERPINF2P08697 491 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 GNSP15586 552 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 POLR2EP19388 210 aaKnown RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 FNDC3BQ53EP0 1204 aaKnown RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 FAM133BQ5BKY9 247 aaKnown RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 WDR45BQ5MNZ6 344 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 RGL4Q8IZJ4 473 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 HJURPQ8NCD3 748 aaPredicted RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 SHC3Q92529 594 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 FCRL2Q96LA5 508 aaPredicted RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 HSPA12BQ96MM6 686 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 MKRN2Q9H000 416 aaKnown RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 NUP62CLQ9H1M0 184 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 STIM2Q9P246 746 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 USP36Q9P275 1121 aaKnown RBP18.44■□□□□ 0.54
TPM1-203ENST00000317516 SUSD2Q9UGT4 822 aa18.44■□□□□ 0.54
TPM1-203ENST00000317516 BECN2A8MW95 431 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 GLI1P08151 1106 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 DLDP09622 509 aaKnown RBP18.43■□□□□ 0.54
TPM1-203ENST00000317516 ENGP17813 658 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 PRKCHP24723 683 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 KRT9P35527 623 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 BPIFB4P59827 614 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 PDCLQ13371 301 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 UAP1L1Q3KQV9 507 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 CT47A1Q5JQC4 288 aaPredicted RBP18.43■□□□□ 0.54
TPM1-203ENST00000317516 EFHC1Q5JVL4 640 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 N4BP2L1Q5TBK1 243 aaPredicted RBP18.43■□□□□ 0.54
TPM1-203ENST00000317516 MBLAC2Q68D91 279 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 ADIPOR2Q86V24 386 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 MFN1Q8IWA4 741 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 CADM4Q8NFZ8 388 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 OR2T3Q8NH03 318 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 FIBINQ8TAL6 211 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 TOE1Q96GM8 510 aaKnown RBP18.43■□□□□ 0.54
TPM1-203ENST00000317516 SLC39A13Q96H72 371 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 NUP58Q9BVL2 599 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 LHX5Q9H2C1 402 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 FBRSQ9HAH7 460 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 ACP6Q9NPH0 428 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 WSB2Q9NYS7 404 aaPredicted RBP18.43■□□□□ 0.54
TPM1-203ENST00000317516 SUN2Q9UH99 717 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 DNAJC12Q9UKB3 198 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 PCDHGC3Q9UN70 934 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 CEP83Q9Y592 693 aa18.43■□□□□ 0.54
TPM1-203ENST00000317516 ATXN2Q99700 1313 aaKnown RBP18.43■□□□□ 0.54
TPM1-203ENST00000317516 SYPP08247 313 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 SLC2A3P11169 496 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 CSRP1P21291 193 aaKnown RBP18.42■□□□□ 0.54
TPM1-203ENST00000317516 SLC6A4P31645 630 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 NOVA1P51513 510 aaKnown RBP18.42■□□□□ 0.54
TPM1-203ENST00000317516 TPMTP51580 245 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 SGSHP51688 502 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 CDK17Q00537 523 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 CAMK2GQ13555 558 aaPredicted RBP18.42■□□□□ 0.54
TPM1-203ENST00000317516 VWA3BQ502W6 1294 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 SYPL2Q5VXT5 272 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 PSAPL1Q6NUJ1 521 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 TAC4Q86UU9 113 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 SLC41A1Q8IVJ1 513 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 ADAM32Q8TC27 787 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 CYB5D2Q8WUJ1 264 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms