RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PLEKHG4Q58EX7 1191 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 OVOS1Q6IE37 1185 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 PPP1R2P3Q6NXS1 205 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 TTC7BQ86TV6 843 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 TMEM173Q86WV6 379 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 RFWD2Q8NHY2 731 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 LINC01599Q8WXQ3 324 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 SERPINB12Q96P63 405 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 KCTD15Q96SI1 283 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 HNRNPABQ99729 332 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 UPF3AQ9H1J1 476 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 TRABDQ9H4I3 376 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 DENND2DQ9H6A0 471 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 MTMR10Q9NXD2 777 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 ARMCX1Q9P291 453 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 PRKAG3Q9UGI9 489 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 CHMP2BQ9UQN3 213 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 VCANP13611 3396 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 FAM47DPA6NHR8 397 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 APOC4-APOC2K7ER74 178 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 APOL1O14791 398 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SCAMP3O14828 347 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 APOC2P02655 101 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 T-ENOLP0DO92 83 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 LRPAP1P30533 357 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 MATKP42679 507 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ROR1Q01973 937 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 DEUP1Q05D60 604 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 RNF220Q5VTB9 566 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ARHGAP17Q68EM7 881 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 LVRNQ6Q4G3 990 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 KCNT2Q6UVM3 1135 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 CD300LGQ6UXG3 332 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ARHGEF18Q6ZSZ5 1173 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 C3orf62Q6ZUJ4 267 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SLC26A9Q7LBE3 791 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 KDELC2Q7Z4H8 507 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 MAP7D3Q8IWC1 876 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 HACE1Q8IYU2 909 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ZNF483Q8TF39 744 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 FAF2Q96CS3 445 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 CELF6Q96J87 481 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 AGAP3Q96P47 875 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 CSPG4P5Q96PW8 444 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 DDX50Q9BQ39 737 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 RNF208Q9H0X6 261 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 DNAH14Q0VDD8 3507 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 REV3LO60673 3130 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 DNALI1O14645 258 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 XPO1O14980 1071 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 NBNO60934 754 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 USP12O75317 370 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 KRT36O76013 467 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 METTL18O95568 372 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 TBX18O95935 607 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ZBED1O96006 694 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ITGAVP06756 1048 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ALADP13716 330 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 KRT4P19013 534 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 WARSP23381 471 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 PTDSS1P48651 473 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 IL9RQ01113 521 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 RIPK1Q13546 671 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SPARCL1Q14515 664 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SETDB1Q15047 1291 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 BOLA3Q53S33 107 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 RNASEH2BQ5TBB1 312 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ANO7Q6IWH7 933 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 GLB1LQ6UWU2 654 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 DENND5BQ6ZUT9 1274 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 PHC3Q8NDX5 983 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SHKBP1Q8TBC3 707 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SLCO2A1Q92959 643 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 MAGEB18Q96M61 343 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 WDR83Q9BRX9 315 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 NRDE2Q9H7Z3 1164 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 UBP1Q9NZI7 540 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SLC17A7Q9P2U7 560 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 MDM4O15151 490 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 CDH16O75309 829 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 FAM155BO75949 473 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 NEFHP12036 1026 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 RPL17P18621 184 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 HOXD10P28358 340 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 YWHAHQ04917 246 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 STILQ15468 1287 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 HIF1AQ16665 826 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 TRIM71Q2Q1W2 868 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 KHDC1Q4VXA5 237 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 HHATQ5VTY9 493 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 OTUD1Q5VV17 481 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 ARMC3Q5W041 872 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 RWDD4Q6NW29 188 aaKnown RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 OTOAQ7RTW8 1153 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 LRRC6Q86X45 466 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 UNC5BQ8IZJ1 945 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 MAB21L3Q8N8X9 362 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 FBXO36Q8NEA4 188 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 LRRC8CQ8TDW0 803 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms