RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 XKR5Q6UX68 686 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 PHF13Q86YI8 300 aaPredicted RBP18.54■□□□□ 0.56
SPSB4-201ENST00000310546 KBTBD7Q8WVZ9 684 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 VCPIP1Q96JH7 1222 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 LENG8Q96PV6 779 aaPredicted RBP18.54■□□□□ 0.56
SPSB4-201ENST00000310546 NEURL2Q9BR09 285 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 VPS33BQ9H267 617 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 TBC1D22BQ9NU19 505 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 IGSF9Q9P2J2 1179 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 ITGB1BP2Q9UKP3 347 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 EXOC7Q9UPT5 735 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 SPAG6O75602 509 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 ASNSP08243 561 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 C21orf59P57076 290 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 CD300CQ08708 224 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 ITGA7Q13683 1181 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 ZNF423Q2M1K9 1284 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 MOB2Q70IA6 237 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 FAM83AQ86UY5 434 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 CENPSQ8N2Z9 138 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 ISOC1Q96CN7 298 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 SERPINI1Q99574 410 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 TCHPQ9BT92 498 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 GCOM2Q9BZD3 368 aaPredicted RBP18.54■□□□□ 0.56
SPSB4-201ENST00000310546 MYRFQ9Y2G1 1151 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 TMEM98Q9Y2Y6 226 aa18.54■□□□□ 0.56
SPSB4-201ENST00000310546 FAM32AQ9Y421 112 aaKnown RBP18.54■□□□□ 0.56
SPSB4-201ENST00000310546 PPARGP37231 505 aaPredicted RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 ALDH3B2P48448 385 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 MS4A2Q01362 244 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 FAM102BQ5T8I3 360 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 LRRC38Q5VT99 294 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 C12orf43Q96C57 262 aaKnown RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 FAM213AQ9BRX8 229 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 TMEM79Q9BSE2 394 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 SLC2A11Q9BYW1 496 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 WDR11Q9BZH6 1224 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 RAB6BQ9NRW1 208 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 SLC9A2Q9UBY0 812 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 CDC14AQ9UNH5 594 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 ZNF536O15090 1300 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 CNTNAP2Q9UHC6 1331 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 C7orf72A4D263 438 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 PSMD12O00232 456 aaPredicted RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 CSPG5O95196 566 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 EIF2AK2P19525 551 aaKnown RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 FGFR3P22607 806 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 CYP24A1Q07973 514 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 SPIDRQ14159 915 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 TRMT10BQ6PF06 316 aaKnown RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 GPR141Q7Z602 305 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 USP37Q86T82 979 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 RFX6Q8HWS3 928 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 MTMR14Q8NCE2 650 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 SPATA18Q8TC71 538 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 RMND5BQ96G75 393 aaPredicted RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 PLEKHA8Q96JA3 519 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 STN1Q9H668 368 aaKnown RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 DDX56Q9NY93 547 aaKnown RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 CROCCQ5TZA2 2017 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 HMX2A2RU54 273 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 C1QAP02745 245 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 FGF3P11487 239 aaPredicted RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 TNNI1P19237 187 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 HMOX2P30519 316 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 PPM1LQ5SGD2 360 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 ZFP1Q6P2D0 407 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 PTAR1Q7Z6K3 402 aaPredicted RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 MYO1HQ8N1T3 1032 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 ZSCAN18Q8TBC5 510 aaPredicted RBP18.53■□□□□ 0.56
SPSB4-201ENST00000310546 CASP10Q92851 521 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 PPP1R36Q96LQ0 422 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 TEKT3Q9BXF9 490 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 TRPC7Q9HCX4 862 aa18.53■□□□□ 0.56
SPSB4-201ENST00000310546 NFIBO00712 420 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 FAM189A1O60320 539 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 P4HA1P13674 534 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 PRDX6P30041 224 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 HMGCS2P54868 508 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 CREB5Q02930 508 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 KLF10Q13118 480 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 N4BP2L1Q5TBK1 243 aaPredicted RBP18.52■□□□□ 0.56
SPSB4-201ENST00000310546 DARS2Q6PI48 645 aaKnown RBP18.52■□□□□ 0.56
SPSB4-201ENST00000310546 TRIM72Q6ZMU5 477 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 TMEM110Q86TL2 294 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 CHERPQ8IWX8 916 aaKnown RBP18.52■□□□□ 0.56
SPSB4-201ENST00000310546 RTKNQ9BST9 563 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 INO80BQ9C086 356 aaPredicted RBP18.52■□□□□ 0.56
SPSB4-201ENST00000310546 TBX20Q9UMR3 447 aa18.52■□□□□ 0.56
SPSB4-201ENST00000310546 MCF2LO15068 1137 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 CDH3P22223 829 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 RARRES1P49788 294 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF280AP59817 542 aaPredicted RBP18.52■□□□□ 0.55
SPSB4-201ENST00000310546 ESRRGP62508 458 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 YWHAZP63104 245 aaKnown RBP18.52■□□□□ 0.55
SPSB4-201ENST00000310546 CYP4A22Q5TCH4 519 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 FKBP1CQ5VVH2 108 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 ARMCX6Q7L4S7 300 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 LDHDQ86WU2 507 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms