RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 RDXP35241 583 aaKnown RBP9.43□□□□□ -0.9
PDE4D-201ENST00000309641 MAGEA1P43355 309 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 PPP2R5DQ14738 602 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 PON2Q15165 354 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 MS4A13Q5J8X5 152 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 STRADAQ7RTN6 431 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 CIR1Q86X95 450 aaPredicted RBP9.43□□□□□ -0.9
PDE4D-201ENST00000309641 CPA6Q8N4T0 437 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 KIAA1958Q8N8K9 716 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 ZNF564Q8TBZ8 553 aaPredicted RBP9.43□□□□□ -0.9
PDE4D-201ENST00000309641 WFDC5Q8TCV5 224 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 CTNNBL1Q8WYA6 563 aaPredicted RBP9.43□□□□□ -0.9
PDE4D-201ENST00000309641 EZH1Q92800 747 aaPredicted RBP9.43□□□□□ -0.9
PDE4D-201ENST00000309641 OTUB2Q96DC9 234 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 BTN2A3PQ96KV6 586 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 PEBP4Q96S96 227 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 BBS2Q9BXC9 721 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 ARHGEF38Q9NXL2 777 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 CTTNBP2NLQ9P2B4 639 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 SALL4Q9UJQ4 1053 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 ANAPC7Q9UJX3 599 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 NDRG2Q9UN36 371 aaKnown RBP9.43□□□□□ -0.9
PDE4D-201ENST00000309641 PCDHA13Q9Y5I0 950 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 HS3ST4Q9Y661 456 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 SCINQ9Y6U3 715 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 DUSP10Q9Y6W6 482 aa9.43□□□□□ -0.9
PDE4D-201ENST00000309641 MIA3Q5JRA6 1907 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 EIF3CLB5ME19 914 aaKnown RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 FAM72CH0Y354 149 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 F9P00740 461 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 TMEM253P0C7T8 217 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 CYLC1P35663 651 aaPredicted RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 SLC11A2P49281 568 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 NUMBP49757 651 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 GALK1P51570 392 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 GSDMDP57764 484 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 STARD6P59095 220 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 FAM72AQ5TYM5 149 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 CWF19L1Q69YN2 538 aaKnown RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 TXNRD3NBQ6F5E7 133 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 ASTLQ6HA08 431 aaPredicted RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 FAM72DQ6L9T8 149 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 FBXL22Q6P050 247 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 SCYL2Q6P3W7 929 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 CYP4V2Q6ZWL3 525 aaPredicted RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 CHSY1Q86X52 802 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 FAM72BQ86X60 149 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 ETFBKMTQ8IXQ9 262 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 LGI2Q8N0V4 545 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 PYROXD2Q8N2H3 581 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 CPXM2Q8N436 756 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 FLCNQ8NFG4 579 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 SLC35G2Q8TBE7 412 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 EIF3CQ99613 913 aaKnown RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 LACRTQ9GZZ8 138 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 TBC1D17Q9HA65 648 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 MRPL47Q9HD33 250 aaKnown RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 RBM12Q9NTZ6 932 aaKnown RBP9.42□□□□□ -0.9
PDE4D-201ENST00000309641 STIM2Q9P246 746 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
PDE4D-201ENST00000309641 HOXC11O43248 304 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 TULP3O75386 442 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 LRCH4O75427 683 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 ADH1CP00326 375 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 PENKP01210 267 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 GLULP15104 373 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 TACR2P21452 398 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 IL1R2P27930 398 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 ADRA1BP35368 520 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 CHKAP35790 457 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 CCZ1BP86790 482 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 CCZ1P86791 482 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 FZD5Q13467 585 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 AUHQ13825 339 aaKnown RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 RALGPS2Q86X27 583 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 ZNF683Q8IZ20 524 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 ATP6V0D2Q8N8Y2 350 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 DDI1Q8WTU0 396 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 FAM3CQ92520 227 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 IGSF8Q969P0 613 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 TMA16Q96EY4 203 aaKnown RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 PDLIM2Q96JY6 352 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 ZNF830Q96NB3 372 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 GOLPH3Q9H4A6 298 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 GPATCH2LQ9NWQ4 482 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 TRIM10Q9UDY6 481 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 PCSK1NQ9UHG2 260 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 ZNF510Q9Y2H8 683 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 GOLGA6L6A8MZA4 724 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 STK25O00506 426 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 TBL1XO60907 577 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 LATS1O95835 1130 aa9.41□□□□□ -0.9
PDE4D-201ENST00000309641 DCNP07585 359 aaKnown RBP9.41□□□□□ -0.9
PDE4D-201ENST00000309641 SLC2A3P11169 496 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms