RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ARSAP15289 507 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 HTR7P34969 479 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 ADRA1BP35368 520 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 NRG1Q02297 640 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 KIF5AQ12840 1032 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 EFHC2Q5JST6 749 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 LY6G5CQ5SRR4 150 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 RHBDF2Q6PJF5 856 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 LRRC31Q6UY01 552 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 SLFN11Q7Z7L1 901 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 CHSY1Q86X52 802 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 CCDC117Q8IWD4 279 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 UBE2Q2Q8WVN8 375 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 WBP2Q969T9 261 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 NELL2Q99435 816 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 SLC2A11Q9BYW1 496 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 OSBPL2Q9H1P3 480 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 GTSE1Q9NYZ3 720 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 GFRA2O00451 464 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 PAGE1O75459 146 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 PROSCO94903 275 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 PENKP01210 267 aaPredicted RBP18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 CCDC175P0C221 793 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 TFE3P19532 575 aaPredicted RBP18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 CTHP32929 405 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 SLC1A1P43005 524 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 OGDHQ02218 1023 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 TNK2Q07912 1038 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 E2F5Q15329 346 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 HADHQ16836 314 aaKnown RBP18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 ANO4Q32M45 955 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 BOLA3Q53S33 107 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 FAM133BQ5BKY9 247 aaKnown RBP18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 MS4A13Q5J8X5 152 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 PIK3R6Q5UE93 754 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 ZNF852Q6ZMS4 543 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 TMA16Q96EY4 203 aaKnown RBP18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 BBS2Q9BXC9 721 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 ADAM33Q9BZ11 813 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 DONSONQ9NYP3 566 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 CALCOCO1Q9P1Z2 691 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 BDP1A6H8Y1 2624 aa18.53■□□□□ 0.56
SSSCA1-201ENST00000309328 SPECC1L-ADORA2AF8WAN1 911 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 CACNG3O60359 315 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 LRCH4O75427 683 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 TACR2P21452 398 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 GJA4P35212 333 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 NOP2P46087 812 aaKnown RBP18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 OXCT1P55809 520 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 STARD6P59095 220 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 CCZ1BP86790 482 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 CCZ1P86791 482 aaPredicted RBP18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 ZNF252P-AS1Q0IIN9 211 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 SCYL2Q6P3W7 929 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 DDI1Q8WTU0 396 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 PRMT1Q99873 361 aaKnown RBP18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 HEBP1Q9NRV9 189 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 USP18Q9UMW8 372 aa18.52■□□□□ 0.56
SSSCA1-201ENST00000309328 KIF26AQ9ULI4 1882 aaPredicted RBP18.52■□□□□ 0.55
SSSCA1-201ENST00000309328 MUC3AQ02505 3323 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 SCAMP3O14828 347 aaKnown RBP18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 KRT86O43790 486 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 TYRP14679 529 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 MIPP30301 263 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 AUHQ13825 339 aaKnown RBP18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 C5orf22Q49AR2 442 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 SH3PXD2AQ5TCZ1 1133 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 RNF43Q68DV7 783 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 NADSYN1Q6IA69 706 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 ZNF662Q6ZS27 426 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 TRIM67Q6ZTA4 783 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 TPGS1Q6ZTW0 290 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 TPRG1Q6ZUI0 275 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 TMEM25Q86YD3 366 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 ACRBPQ8NEB7 543 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 TEKT4Q8WW24 435 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 PPP1R9BQ96SB3 815 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 EPAS1Q99814 870 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 COL25A1Q9BXS0 654 aaPredicted RBP18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 OSBPL6Q9BZF3 934 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 TRIM7Q9C029 511 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 OSGEPQ9NPF4 335 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 PPARGC1AQ9UBK2 798 aaKnown RBP18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 REXO2Q9Y3B8 237 aaKnown RBP18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 ADGRG1Q9Y653 693 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 HS3ST4Q9Y661 456 aa18.51■□□□□ 0.55
SSSCA1-201ENST00000309328 NEDD8-MDP1E9PL57 170 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 TRDMT1O14717 391 aaKnown RBP18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 NCAM2O15394 837 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 KRT7P08729 469 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 DRD1P21728 446 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 L1CAMP32004 1257 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 ATXN1P54253 815 aaKnown RBP18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 GRSF1Q12849 480 aaKnown RBP eCLIP18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 ERMARDQ5T6L9 678 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 FYB2Q5VWT5 728 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 RAP1GAP2Q684P5 730 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 CHST9Q7L1S5 443 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 POLNQ7Z5Q5 900 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 ETFBKMTQ8IXQ9 262 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms