RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PGM2Q96G03 612 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 B3GALT6Q96L58 329 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 TTC25Q96NG3 672 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 ROPN1BQ9BZX4 212 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-205ENST00000307859 FBXO44Q9H4M3 255 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 WDCPQ9H6R7 721 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 CWH43Q9H720 699 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 ROPN1Q9HAT0 212 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-205ENST00000307859 TMEM39AQ9NV64 488 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 EYSQ5T1H1 3165 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 NYNRINQ9P2P1 1898 aaKnown RBP12.28□□□□□ -0.44
TRIM40-205ENST00000307859 FAM92AA1XBS5 289 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 MTMR11A4FU01 709 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 NT5C1B-RDH14C9J2C7 533 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 E7ESA3 106 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 FAM72CH0Y354 149 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 ALOX15BO15296 676 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 CHADO15335 359 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 CREB3O43889 395 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TCEA3O75764 348 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TMEM63AO94886 807 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 MAP3K6O95382 1288 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 VNN2O95498 520 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 NR1D1P20393 614 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 ACTN2P35609 894 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 PBX3P40426 434 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 GPR15P49685 360 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 PRKD1Q15139 912 aaPredicted RBP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 HIF1AQ16665 826 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TMEM31Q5JXX7 168 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 BRMS1LQ5PSV4 323 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 FAM72AQ5TYM5 149 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 FAM72DQ6L9T8 149 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 MSANTD2Q6P1R3 559 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 RSPO2Q6UXX9 243 aaPredicted RBP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 CENPUQ71F23 418 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 ALYREFQ86V81 257 aaKnown RBP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 FAM72BQ86X60 149 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TTC9BQ8N6N2 239 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 ATAD1Q8NBU5 361 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 C2orf15Q8WU43 125 aaKnown RBP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TIFAQ96CG3 184 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 C9orf72Q96LT7 481 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 PGLYRP2Q96PD5 576 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TTPALQ9BTX7 342 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TKTL2Q9H0I9 626 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 NMUR1Q9HB89 426 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 SAYSD1Q9NPB0 183 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 PRDM5Q9NQX1 630 aaPredicted RBP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 TMEM51Q9NW97 253 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 ARHGEF38Q9NXL2 777 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 CXXC1Q9P0U4 656 aaPredicted RBP12.27□□□□□ -0.44
TRIM40-205ENST00000307859 RAD54BQ9Y620 910 aa12.27□□□□□ -0.44
TRIM40-205ENST00000307859 OBSL1O75147 1896 aa12.27□□□□□ -0.45
TRIM40-205ENST00000307859 ABHD14A-ACY1A0A1B0GW23 586 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 TCRBV7S3A2A0A539 114 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 C5orf60A6NFR6 353 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 GCATO75600 419 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 CPB1P15086 417 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 PGFP49763 221 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 ARL4CP56559 192 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 TPI1P60174 286 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 BASP1P80723 227 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 IFRD2Q12894 506 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 DDR2Q16832 855 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 TNFAIP8L3Q5GJ75 292 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 C6orf118Q5T5N4 469 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 MFSD5Q6N075 450 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 MON1AQ86VX9 555 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 ARHGAP18Q8N392 663 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 UHMK1Q8TAS1 419 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 EPS8L3Q8TE67 593 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 TFB1MQ8WVM0 346 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 SPATA17Q96L03 361 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 OSBPL2Q9H1P3 480 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 CENPHQ9H3R5 247 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 A0A1W2PQH9 124 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 TRIM43BA6NCK2 446 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 RASGRF2O14827 1237 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 SHOX2O60902 331 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 ZNF189O75820 626 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 UPP2O95045 317 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 HAPLN1P10915 354 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 BMP1P13497 986 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 VAV1P15498 845 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 ERCC2P18074 760 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 ALDH7A1P49419 539 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 GLUD2P49448 558 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 GAD2Q05329 585 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 PPP2R5DQ14738 602 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 FASTKD3Q14CZ7 662 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 PDK1Q15118 436 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 SDHAF4Q5VUM1 108 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 HEATR6Q6AI08 1181 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 RNF19BQ6ZMZ0 732 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 TAS1R1Q7RTX1 841 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 PPM1EQ8WY54 764 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 CASP10Q92851 521 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms