RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 PITPNM3Q9BZ71 974 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ARL2BPQ9Y2Y0 163 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ZNF638Q14966 1978 aaKnown RBP17.03■□□□□ 0.32
TVP23B-201ENST00000307767 BRCA2P51587 3418 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 F5H423 210 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-201ENST00000307767 TRDMT1O14717 391 aaKnown RBP17.03■□□□□ 0.32
TVP23B-201ENST00000307767 EDF1O60869 148 aaKnown RBP17.03■□□□□ 0.32
TVP23B-201ENST00000307767 B3GAT3O94766 335 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 SUN1O94901 812 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 UBOX5O94941 541 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ZWINTO95229 277 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 APOEP02649 317 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 CSH1P0DML2 217 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 CSH2P0DML3 217 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ERCC2P18074 760 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 INTS6LQ5JSJ4 861 aaKnown RBP17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ARTNQ5T4W7 220 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 TRAF7Q6Q0C0 670 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-201ENST00000307767 SLC26A11Q86WA9 606 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 NPWQ8N729 165 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 COLGALT1Q8NBJ5 622 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ARNTL2Q8WYA1 636 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ZNF75CPQ92670 426 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-201ENST00000307767 PTPRN2Q92932 1015 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 SMARCD1Q96GM5 515 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 ACBD6Q9BR61 282 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 STARD13Q9Y3M8 1113 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 SNX10Q9Y5X0 201 aa17.03■□□□□ 0.32
TVP23B-201ENST00000307767 FAM159BA6NKW6 160 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 RNF103O00237 685 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 EEF2KO00418 725 aaKnown RBP17.02■□□□□ 0.32
TVP23B-201ENST00000307767 DNAJC8O75937 253 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-201ENST00000307767 NCAM1P13591 858 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
TVP23B-201ENST00000307767 RAB27AP51159 221 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 EIF4EBP2Q13542 120 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-201ENST00000307767 CDHR3Q6ZTQ4 885 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 ZNF567Q8N184 647 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 PPM1NQ8N819 430 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 HASPINQ8TF76 798 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 EDEM1Q92611 657 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 MOCS1Q9NZB8 636 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 ZNF180Q9UJW8 692 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 PHTF1Q9UMS5 762 aa17.02■□□□□ 0.32
TVP23B-201ENST00000307767 INPPL1O15357 1258 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 BDNFP23560 247 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 PCSK1P29120 753 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 CXCR3P49682 368 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 TTC31Q49AM3 519 aaPredicted RBP17.01■□□□□ 0.31
TVP23B-201ENST00000307767 RNF43Q68DV7 783 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 LRRC6Q86X45 466 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 UNC5BQ8IZJ1 945 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 PDCD7Q8N8D1 485 aaKnown RBP17.01■□□□□ 0.31
TVP23B-201ENST00000307767 RSPH1Q8WYR4 309 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 DPF3Q92784 378 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 ALKBH8Q96BT7 664 aaKnown RBP17.01■□□□□ 0.31
TVP23B-201ENST00000307767 COLEC11Q9BWP8 271 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 IQANK1A0A1B0GTG1 560 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 CAPN9O14815 690 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 RFPL1O75677 317 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 MT-ND3P03897 115 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
TVP23B-201ENST00000307767 RPLP2P05387 115 aaKnown RBP17.01■□□□□ 0.31
TVP23B-201ENST00000307767 GSTA1P08263 222 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 INHBAP08476 426 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 GSTA2P09210 222 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 ODC1P11926 461 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 HCAR3P49019 387 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 PGFP49763 221 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 TUSC3Q13454 348 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 MBTPS1Q14703 1052 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 STEAP4Q687X5 459 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 BZW1Q7L1Q6 419 aaKnown RBP17.01■□□□□ 0.31
TVP23B-201ENST00000307767 GRAMD1AQ96CP6 724 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
TVP23B-201ENST00000307767 SLC40A1Q9NP59 571 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 PCDHA11Q9Y5I1 949 aa17.01■□□□□ 0.31
TVP23B-201ENST00000307767 THSD7BQ9C0I4 1608 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 TRIM49D1C9J1S8 452 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 TM9SF1O15321 606 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 PYGBP11216 843 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 IBSPP21815 317 aaPredicted RBP17■□□□□ 0.31
TVP23B-201ENST00000307767 PSMB4P28070 264 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 FDFT1P37268 417 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 AIF1P55008 147 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 AP1B1Q10567 949 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 GRIK3Q13003 919 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 ITGA7Q13683 1181 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 PDK1Q15118 436 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 FAM133BQ5BKY9 247 aaKnown RBP17■□□□□ 0.31
TVP23B-201ENST00000307767 HHATQ5VTY9 493 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 OTOAQ7RTW8 1153 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 SCML4Q8N228 414 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 GSDMBQ8TAX9 411 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 ZSCAN18Q8TBC5 510 aaPredicted RBP17■□□□□ 0.31
TVP23B-201ENST00000307767 EIF2B3Q9NR50 452 aaKnown RBP17■□□□□ 0.31
TVP23B-201ENST00000307767 DDIT4Q9NX09 232 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 NEU3Q9UQ49 428 aa17■□□□□ 0.31
TVP23B-201ENST00000307767 GTF3C5Q9Y5Q8 519 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms