RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 I6L893 689 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 GRID2O43424 1007 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TFE3P19532 575 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 CPA2P48052 419 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 RASSF2P50749 326 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 SLC25A3Q00325 362 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 IKQ13123 557 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 ITGA9Q13797 1035 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 BTG3Q14201 252 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 CA9Q16790 459 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 KLHL38Q2WGJ6 581 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 NADK2Q4G0N4 442 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TBC1D10BQ4KMP7 808 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 FAM47CQ5HY64 1035 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 C6orf10Q5SRN2 563 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 FAM160B1Q5W0V3 765 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 MAP1SQ66K74 1059 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 PCDH19Q8TAB3 1148 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ZNF419Q96HQ0 510 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 ACAP3Q96P50 834 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 LBHD1Q9BQE6 289 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 TRIM55Q9BYV6 548 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CXCL16Q9H2A7 254 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 IFT122Q9HBG6 1241 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CISHQ9NSE2 258 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CD300AQ9UGN4 299 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CIDEBQ9UHD4 219 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 HACL1Q9UJ83 578 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ZBTB12Q9Y330 459 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 COL4A6Q14031 1691 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 MYO18AQ92614 2054 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 MYOCOSA0A1B0GUC4 107 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 B2RBV5 119 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 E9PQ18 207 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 GOLGA8SH3BPF8 625 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 H3BRJ5 948 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 GOLGA8MH3BSY2 632 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PLOD2O00469 737 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 HNRNPDLO14979 420 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 GYG2O15488 501 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 MED7O43513 233 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PLIN3O60664 434 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 GCATO75600 419 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 USP2O75604 605 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 C22orf31O95567 290 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 SLC25A27O95847 323 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 EGFRP00533 1210 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 JUNP05412 331 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 C8BP07358 591 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ZCCHC18P0CG32 403 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 MLNP12872 115 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PGM1P36871 562 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PTPN9P43378 593 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 LIG4P49917 911 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 SARNPP82979 210 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 USP4Q13107 963 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PEX6Q13608 980 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ACAP2Q15057 778 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PDK2Q15119 407 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 RBBP5Q15291 538 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 TBCCQ15814 346 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 FAM219BQ5XKK7 198 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 KCTD11Q693B1 232 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CHSY3Q70JA7 882 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 SLC26A11Q86WA9 606 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 RHPN2Q8IUC4 686 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 MFSD6LQ8IWD5 586 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 LRRC43Q8N309 656 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CCDC77Q9BR77 488 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PLEKHA5Q9HAU0 1116 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 NRBP2Q9NSY0 501 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PIM2Q9P1W9 311 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 XPO7Q9UIA9 1087 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 A0A0G2JND7 137 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 SMIM31A0A1B0GVY4 71 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 LPXNO60711 386 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 RAD17O75943 681 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 CRTAMO95727 393 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 HSPA1AP0DMV8 641 aaKnown RBP5.61□□□□□ -1.51
VPS50-202ENST00000305866 HSPA1BP0DMV9 641 aaKnown RBP5.61□□□□□ -1.51
VPS50-202ENST00000305866 BRD2P25440 801 aaKnown RBP5.61□□□□□ -1.51
VPS50-202ENST00000305866 ACVR2AP27037 513 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 SEMA5AQ13591 1074 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 CEACAM7Q14002 265 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 DUOXA2Q1HG44 320 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 CCDC14Q49A88 953 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 TTC39BQ5VTQ0 682 aaPredicted RBP5.61□□□□□ -1.51
VPS50-202ENST00000305866 SNRNP48Q6IEG0 339 aaKnown RBP5.61□□□□□ -1.51
VPS50-202ENST00000305866 OLFML1Q6UWY5 402 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 SCML4Q8N228 414 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 PLD6Q8N2A8 252 aaKnown RBP5.61□□□□□ -1.51
VPS50-202ENST00000305866 FBXW8Q8N3Y1 598 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 SLC25A41Q8N5S1 370 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 GTF3C2Q8WUA4 911 aaPredicted RBP5.61□□□□□ -1.51
VPS50-202ENST00000305866 PYDC1Q8WXC3 89 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 UBXN10Q96LJ8 280 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 ELOVL4Q9GZR5 314 aa5.61□□□□□ -1.51
VPS50-202ENST00000305866 TNFRSF12AQ9NP84 129 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms