RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 TCTN1Q2MV58 587 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 NOMO2Q5JPE7 1267 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 THEM5Q8N1Q8 247 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 PPM1NQ8N819 430 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 TET1Q8NFU7 2136 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 ZNF296Q8WUU4 475 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 CABS1Q96KC9 395 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 SUSD3Q96L08 255 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 ACSS3Q9H6R3 686 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 CFAP69A5D8W1 941 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 NBNO60934 754 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 GCATO75600 419 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 TOMM70O94826 608 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 MOCS2O96007 188 aaPredicted RBP11.74□□□□□ -0.53
SCG2-201ENST00000305409 CYP11A1P05108 521 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 CA4P22748 312 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 EPHB2P29323 1055 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 VEGFBP49765 207 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 FAAP100Q0VG06 881 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 DPYSQ14117 519 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 GKAP1Q5VSY0 366 aaPredicted RBP11.74□□□□□ -0.53
SCG2-201ENST00000305409 RWDD4Q6NW29 188 aaKnown RBP11.74□□□□□ -0.53
SCG2-201ENST00000305409 CASC4Q6P4E1 433 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 CES3Q6UWW8 571 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 CACNA2D3Q8IZS8 1091 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 ATAD1Q8NBU5 361 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 DQX1Q8TE96 717 aaKnown RBP11.74□□□□□ -0.53
SCG2-201ENST00000305409 DCAKDQ8WVC6 231 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 SMC6Q96SB8 1091 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 CSNK1G1Q9HCP0 422 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 SMYD2Q9NRG4 433 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 OR12D3Q9UGF7 316 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 THSD7BQ9C0I4 1608 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 FAM47DPA6NHR8 397 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 DCLK1O15075 740 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 CABYRO75952 493 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 LRIG2O94898 1065 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 GPNMBQ14956 572 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 PID1Q7Z2X4 250 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 ZNF567Q8N184 647 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 SCLYQ96I15 445 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 TGS1Q96RS0 853 aaKnown RBP11.74□□□□□ -0.53
SCG2-201ENST00000305409 NMUR1Q9HB89 426 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 WDR27A2RRH5 827 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 C5orf60A6NFR6 353 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 TADA2AO75478 443 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 WASHC5Q12768 1159 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 XRCC4Q13426 336 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 BMPR2Q13873 1038 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 UNC5AQ6ZN44 842 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 TDRPQ86YL5 185 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 COLGALT2Q8IYK4 626 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 USP33Q8TEY7 942 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 CKAP2Q8WWK9 683 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 FAM193BQ96PV7 902 aaPredicted RBP11.74□□□□□ -0.53
SCG2-201ENST00000305409 OSER1Q9NX31 292 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 UBP1Q9NZI7 540 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 SLC27A5Q9Y2P5 690 aa11.74□□□□□ -0.53
SCG2-201ENST00000305409 A0A0A0MRY4 1105 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 A0A1W2PQH9 124 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 ARVCFO00192 962 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 NDC80O14777 642 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
SCG2-201ENST00000305409 CPP00450 1065 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 CORO7P57737 925 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 ADGRD1Q6QNK2 874 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 PPP1R21Q6ZMI0 780 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 ARHGAP36Q6ZRI8 547 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 LRRC8DQ7L1W4 858 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 VSIG1Q86XK7 387 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 OTUD6BQ8N6M0 293 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 CASP10Q92851 521 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 SERAC1Q96JX3 654 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 SPATA13Q96N96 652 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 CYTH2Q99418 400 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 APOL2Q9BQE5 337 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 GPR62Q9BZJ7 368 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 SLCO1B3Q9NPD5 702 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 SLC17A7Q9P2U7 560 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 TTLL3Q9Y4R7 772 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 TRIM17Q9Y577 477 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.73□□□□□ -0.53
SCG2-201ENST00000305409 ZNF487B1APH4 448 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 KIAA0754O94854 1291 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 ATP2A2P16615 1042 aaKnown RBP11.73□□□□□ -0.53
SCG2-201ENST00000305409 CCL23P55773 120 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 USP46P62068 366 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 DNAJC3Q13217 504 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 MTFR1Q15390 333 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 FAM171A1Q5VUB5 890 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 PM20D1Q6GTS8 502 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 SCD5Q86SK9 330 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 TMEM173Q86WV6 379 aaPredicted RBP11.73□□□□□ -0.53
SCG2-201ENST00000305409 RIBC1Q8N443 379 aaPredicted RBP11.73□□□□□ -0.53
SCG2-201ENST00000305409 SIGLEC10Q96LC7 697 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 UNC93B1Q9H1C4 597 aa11.73□□□□□ -0.53
SCG2-201ENST00000305409 KLHL8Q9P2G9 620 aaPredicted RBP11.73□□□□□ -0.53
SCG2-201ENST00000305409 SLC24A2Q9UI40 661 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms