RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SLC2A13Q96QE2 648 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 VPS45Q9NRW7 570 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 CALCOCO1Q9P1Z2 691 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 DAAM1Q9Y4D1 1078 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 RAD54BQ9Y620 910 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 WASH3PC4AMC7 463 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 ZNF217O75362 1048 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 ERBB2P04626 1255 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 SGSHP51688 502 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 CREB5Q02930 508 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 ENPP2Q13822 863 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 MAP7D1Q3KQU3 841 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 RNF43Q68DV7 783 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 NADSYN1Q6IA69 706 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 OLFML1Q6UWY5 402 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 FAM183BPQ6ZVS7 135 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 LPCAT2Q7L5N7 544 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 ERMP1Q7Z2K6 904 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 AHI1Q8N157 1196 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 BTN2A3PQ96KV6 586 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 FAM204AQ9H8W3 233 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 ABCB8Q9NUT2 735 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 SLC12A6Q9UHW9 1150 aa27.44■■□□□ 1.98
CDKN2A-201ENST00000304494 SPAG17Q6Q759 2223 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 MOCS2O96007 188 aaPredicted RBP27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 SLC2A3P11169 496 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 NDUFV2P19404 249 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 CDH5P33151 784 aaPredicted RBP27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 IL12RB1P42701 662 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 ZNF234Q14588 700 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 CCDC6Q16204 474 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 PTPN20Q4JDL3 420 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 SPDYCQ5MJ68 293 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 TMEM215Q68D42 235 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 DEFB106AQ8N104 65 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 NETO1Q8TDF5 533 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 GANQ9H2C0 597 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 LIMA1Q9UHB6 759 aaKnown RBP27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 GGA2Q9UJY4 613 aa27.43■■□□□ 1.98
CDKN2A-201ENST00000304494 SPTBN4Q9H254 2564 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 BCLAF3A2AJT9 711 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 SYNCRIPO60506 623 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 LSM8O95777 96 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 PABPC1P11940 636 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 COPB1P53618 953 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 SLC6A3Q01959 620 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 ZC3H12AQ5D1E8 599 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 MS4A13Q5J8X5 152 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 SLC36A4Q6YBV0 504 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 SLC26A9Q7LBE3 791 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 KIAA0907Q7Z7F0 614 aaPredicted RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 CCDC117Q8IWD4 279 aaPredicted RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 ATP6V0D2Q8N8Y2 350 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 PRICKLE1Q96MT3 831 aaPredicted RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 NAT10Q9H0A0 1025 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 NUCKS1Q9H1E3 243 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 FAM207AQ9NSI2 230 aaPredicted RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 DDIT4Q9NX09 232 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 PLA2G4CQ9UP65 541 aa27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 MYO18AQ92614 2054 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-201ENST00000304494 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 CAVIN2O95810 425 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 CDK11BP21127 795 aaKnown RBP27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 FOXK2Q01167 660 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 TYRO3Q06418 890 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 MTA1Q13330 715 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 EIF4EBP2Q13542 120 aaPredicted RBP27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 AASDHQ4L235 1098 aaPredicted RBP27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 SERPINA13PQ6UXR4 307 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 CHST9Q7L1S5 443 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 DGLUCYQ7Z3D6 616 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 CYP2U1Q7Z449 544 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 MFN1Q8IWA4 741 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 ZNF397Q8NF99 534 aaPredicted RBP27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 SORCS1Q8WY21 1168 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 MRGPRX1Q96LB2 322 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 RTKNQ9BST9 563 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 TMEM63CQ9P1W3 806 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 STIM2Q9P246 746 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 MBD1Q9UIS9 605 aaPredicted RBP27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 DNAH14Q0VDD8 3507 aa27.41■■□□□ 1.98
CDKN2A-201ENST00000304494 DAB1O75553 588 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 GRAP2O75791 330 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 ABCB4P21439 1286 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 CCR1P32246 355 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 DHPSP49366 369 aaPredicted RBP27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 POLR2FP61218 127 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 PITX1P78337 314 aaPredicted RBP27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 SF3A2Q15428 464 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 FUT11Q495W5 492 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 TAF3Q5VWG9 929 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 NOP9Q86U38 636 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 ZNF677Q86XU0 584 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 FRMD1Q8N878 549 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 MSANTD4Q8NCY6 345 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 FIBINQ8TAL6 211 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 EPS8L1Q8TE68 723 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 DDX1Q92499 740 aaKnown RBP27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms