RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 SIPA1Q96FS4 1042 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 HSPA12BQ96MM6 686 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 ATXN2Q99700 1313 aaKnown RBP17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 CEP295Q9C0D2 2601 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 ITM2CQ9NQX7 267 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 ST7Q9NRC1 585 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 GGA2Q9UJY4 613 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 CLEC4EQ9ULY5 219 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 TLR6Q9Y2C9 796 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 UPK3BL1B0FP48 263 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 UPK3BL2E5RIL1 263 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 PIK3R2O00459 728 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 ACSL4O60488 711 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 TSPAN3O60637 253 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 GABBR2O75899 941 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 IGLV3-19P01714 112 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 ATP5BP06576 529 aaKnown RBP17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 GNA15P30679 374 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 SH3PXD2AQ5TCZ1 1133 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 PIK3R6Q5UE93 754 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 TMEM215Q68D42 235 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 TRIM65Q6PJ69 517 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 GBP6Q6ZN66 633 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 KIAA0907Q7Z7F0 614 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 SLC41A1Q8IVJ1 513 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 CLEC4CQ8WTT0 213 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 FAM149B1Q96BN6 582 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 MED15Q96RN5 788 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 MKRN2Q9H000 416 aaKnown RBP17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 MIS12Q9H081 205 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 PCED1AQ9H1Q7 454 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 SLC32A1Q9H598 525 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 CAPN10Q9HC96 672 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 ABCB8Q9NUT2 735 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 WSB2Q9NYS7 404 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.36
TRAPPC1-201ENST00000303731 CAPN9O14815 690 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 C7P10643 843 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 PABPC1P11940 636 aaKnown RBP17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 CAMK2GQ13555 558 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 UAP1L1Q3KQV9 507 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 FNDC3BQ53EP0 1204 aaKnown RBP17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 CHST9Q7L1S5 443 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 TMEM110Q86TL2 294 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 CCDC117Q8IWD4 279 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 SCUBE3Q8IX30 993 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 RGL4Q8IZJ4 473 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 HDDC3Q8N4P3 179 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 OR2T3Q8NH03 318 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 DQX1Q8TE96 717 aaKnown RBP17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 ZNF606Q8WXB4 792 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 TOE1Q96GM8 510 aaKnown RBP17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 NUP58Q9BVL2 599 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 SLC4A5Q9BY07 1137 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 SLC6A17Q9H1V8 727 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 APEX2Q9UBZ4 518 aa17.32■□□□□ 0.36
TRAPPC1-201ENST00000303731 MAP1BP46821 2468 aaKnown RBP17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 PCDH15Q96QU1 1955 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 MUC22E2RYF6 1773 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 ARHGAP33O14559 1287 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 THAP12O43422 761 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 TBL1XO60907 577 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 DLDP09622 509 aaKnown RBP17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 PRKCHP24723 683 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 MAPK8P45983 427 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 TPMTP51580 245 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 COPAP53621 1224 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 SNX16P57768 344 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 ZBTB16Q05516 673 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 CAMK4Q16566 473 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 EXOC3L4Q17RC7 722 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 FAM133BQ5BKY9 247 aaKnown RBP17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 ADIPOR2Q86V24 386 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 MFN1Q8IWA4 741 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 DEFB119Q8N690 84 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 ERLEC1Q96DZ1 483 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 FCRL2Q96LA5 508 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 ZDHHC5Q9C0B5 715 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 TMEM245Q9H330 911 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 THAP9Q9H5L6 903 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 POPDC2Q9HBU9 364 aa17.31■□□□□ 0.36
TRAPPC1-201ENST00000303731 MEI4A8MW99 385 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 OPHN1O60890 802 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 APOEP02649 317 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 FYNP06241 537 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 POLR2EP19388 210 aaKnown RBP17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 YWHAZP63104 245 aaKnown RBP17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 ZNF252P-AS1Q0IIN9 211 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 MTA1Q13330 715 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 HNRNPDQ14103 355 aaKnown RBP17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 TPD52L1Q16890 204 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 MBLAC2Q68D91 279 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 DENND1BQ6P3S1 775 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 RFWD3Q6PCD5 774 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 CREBRFQ8IUR6 639 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 FIBINQ8TAL6 211 aa17.3■□□□□ 0.36
TRAPPC1-201ENST00000303731 SORCS1Q8WY21 1168 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms